RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 DLG3Q92796 817 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 SEMA4GQ9NTN9 838 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 TRPM5Q9NZQ8 1165 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 SYNPO2Q9UMS6 1093 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 B3GALT1Q9Y5Z6 326 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 HOXA3O43365 443 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 HIP1RO75146 1068 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 STK10O94804 968 aaKnown RBP3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 MATN4O95460 622 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 WNT3AP56704 352 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 GABREP78334 506 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 MXRA7P84157 204 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 FHL1Q13642 323 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 SEC23AQ15436 765 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 MAN2A1Q16706 1144 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 MTERF2Q49AM1 385 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 SPATC1Q76KD6 591 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 BMP8AQ7Z5Y6 402 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 CKAP2LQ8IYA6 745 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 LILRA3Q8N6C8 439 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 OR52N2Q8NGI0 321 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 DYDC2Q96IM9 177 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 POLR3BQ9NW08 1133 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZNF580Q9UK33 172 aa3.22□□□□□ -1.89
HMGB3P17-201ENST00000504195 RASSF10A6NK89 507 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 KCNK3O14649 394 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PDPK1O15530 556 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 ADCY3O60266 1144 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 DNAJC6O75061 913 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 NCR1O76036 304 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 NDUFA10O95299 355 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 SPATA31D3P0C874 917 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PTGER1P34995 402 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 DNM2P50570 870 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 ANTXR2P58335 489 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 SSRP1Q08945 709 aaKnown RBP3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 FAM209AQ5JX71 171 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 SPATA31D4Q6ZUB0 917 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 DOK3Q7L591 496 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZBTB38Q8NAP3 1195 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PDPRQ8NCN5 879 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 EPC1Q9H2F5 836 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 ALG13Q9NP73 1137 aaKnown RBP3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PPP1R1BQ9UD71 204 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PFDN2Q9UHV9 154 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 HDAC5Q9UQL6 1122 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 MSRB2Q9Y3D2 182 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 PCDHA9Q9Y5H5 950 aa3.21□□□□□ -1.9
HMGB3P17-201ENST00000504195 MAST3O60307 1309 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 EGR2P11161 476 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 APOBEC3AP31941 199 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 MPLP40238 635 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 FNTBP49356 437 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 CCT4P50991 539 aaKnown RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 BCAR1P56945 870 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 FAM189BP81408 668 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 RASGRF1Q13972 1273 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 TMEM132BQ14DG7 1078 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 RTN4RL1Q86UN2 441 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 CISD2Q8N5K1 135 aaKnown RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZBTB8BQ8NAP8 495 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 RPGRQ92834 1020 aaKnown RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 ERCC4Q92889 916 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 FOXRED1Q96CU9 486 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 FCRL4Q96PJ5 515 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 DHRS4Q9BTZ2 278 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 OSBPL6Q9BZF3 934 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 HAPLN2Q9GZV7 340 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 WWOXQ9NZC7 414 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 MAGEL2Q9UJ55 1249 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 CHST2Q9Y4C5 530 aa3.2□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLC12A8A0AV02 714 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CCDC85CA6NKD9 419 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 H3BNC9 293 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CRTAMO95727 393 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 PRLP01236 227 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 C6orf222P0C671 652 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 DDX6P26196 483 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 RARRES1P49788 294 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CACNA2D1P54289 1103 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 EZH2Q15910 746 aaKnown RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 LONRF2Q1L5Z9 754 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZC3H12BQ5HYM0 836 aaKnown RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CATSPEREQ5SY80 951 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 PIK3R6Q5UE93 754 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CC2D1AQ6P1N0 951 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZNF517Q6ZMY9 492 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 SH2D3CQ8N5H7 860 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CPEB3Q8NE35 698 aaKnown RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 MAML3Q96JK9 1138 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 WACQ9BTA9 647 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 ENKD1Q9H0I2 346 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CCDC113Q9H0I3 377 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 IGSF5Q9NSI5 407 aa3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 MRPS23Q9Y3D9 190 aaKnown RBP3.19□□□□□ -1.9
HMGB3P17-201ENST00000504195 CGB1A6NKQ9 187 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 PRR23D1E9PI22 279 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 EFCAB14O75071 495 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 STC2O76061 302 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms