RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 BCAR1P56945 870 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 RNASELQ05823 741 aaKnown RBP13.31□□□□□ -0.28
MED28-203ENST00000503945 POU5F1BQ06416 359 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
MED28-203ENST00000503945 ZNF174Q15697 407 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 PRSS33Q8NF86 280 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 VN1R2Q8NFZ6 395 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 LPPQ93052 612 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 OFD1O75665 1012 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 ERLIN2O94905 339 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 CXCL14O95715 111 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
MED28-203ENST00000503945 AXLP30530 894 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 DUSP6Q16828 381 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 NOMO2Q5JPE7 1267 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
MED28-203ENST00000503945 MRPL43Q8N983 215 aaKnown RBP13.3□□□□□ -0.28
MED28-203ENST00000503945 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 RPGRIP1Q96KN7 1286 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
MED28-203ENST00000503945 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
MED28-203ENST00000503945 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
MED28-203ENST00000503945 A0A087WWV3 80 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 NT5C1B-RDH14C9J2C7 533 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 FSCN2O14926 492 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 HOXA11P31270 313 aaPredicted RBP13.29□□□□□ -0.28
MED28-203ENST00000503945 ARL2P36404 184 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 PBX3P40426 434 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 PTENP60484 403 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 ST3GAL1Q11201 340 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
MED28-203ENST00000503945 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
MED28-203ENST00000503945 PLPP4Q5VZY2 271 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 CATSPER3Q86XQ3 398 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 SLC39A11Q8N1S5 342 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 URGCPQ8TCY9 931 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 SUSD6Q92537 303 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 KIF2CQ99661 725 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 S1PR5Q9H228 398 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 TMEM60Q9H2L4 133 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
MED28-203ENST00000503945 NOL7Q9UMY1 257 aaKnown RBP13.29□□□□□ -0.28
MED28-203ENST00000503945 HIDE1A8MVS5 230 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 WNT7AO00755 349 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 ST18O60284 1047 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
MED28-203ENST00000503945 GALTP07902 379 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 SPATA31C1P0DKV0 1188 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 ITGA4P13612 1032 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 CA8P35219 290 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 TRAPPC10P48553 1259 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 RARRES1P49788 294 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 KCNC3Q14003 757 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 GIT2Q14161 759 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 NOTUMQ6P988 496 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
MED28-203ENST00000503945 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 VPS52Q8N1B4 723 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 POLR3CQ9BUI4 534 aaPredicted RBP13.28□□□□□ -0.28
MED28-203ENST00000503945 GBP3Q9H0R5 595 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
MED28-203ENST00000503945 XPNPEP1Q9NQW7 623 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 TBC1D13Q9NVG8 400 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
MED28-203ENST00000503945 KMT2EQ8IZD2 1858 aa13.27□□□□□ -0.28
MED28-203ENST00000503945 POTEMA6NI47 508 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 OR52Z1P0C646 297 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 HOXB8P17481 243 aaPredicted RBP13.27□□□□□ -0.29
MED28-203ENST00000503945 NCLP19338 710 aaKnown RBP13.27□□□□□ -0.29
MED28-203ENST00000503945 RPA1P27694 616 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 TCF15Q12870 199 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 PDIA5Q14554 519 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 RABEP1Q15276 862 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 TTC38Q5R3I4 469 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 AGMOQ6ZNB7 445 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 MCPH1Q8NEM0 835 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 IGSF21Q96ID5 467 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 APOL5Q9BWW9 433 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 TRIM6Q9C030 488 aaPredicted RBP13.27□□□□□ -0.29
MED28-203ENST00000503945 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 STK39Q9UEW8 545 aa13.27□□□□□ -0.29
MED28-203ENST00000503945 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.29
MED28-203ENST00000503945 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms