RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PTENP60484 403 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 IRX6P78412 446 aaPredicted RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 DSC1Q08554 894 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 SPIRE1Q08AE8 756 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 ASTLQ6HA08 431 aaPredicted RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 AGMOQ6ZNB7 445 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CATSPER4Q7RTX7 472 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 NEK8Q86SG6 692 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 FERMT3Q86UX7 667 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 TMEM173Q86WV6 379 aaPredicted RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 RHPN2Q8IUC4 686 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 SLFN12Q8IYM2 578 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 TDRD5Q8NAT2 981 aaKnown RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 URGCPQ8TCY9 931 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 KLHL5Q96PQ7 755 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 PPP1R16BQ96T49 567 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 ZSWIM4Q9H7M6 989 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 RSAD1Q9HA92 442 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 FOXD4L1Q9NU39 408 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 PIN4Q9Y237 131 aaKnown RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CACNA1HO95180 2353 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 DOCK8Q8NF50 2099 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 DDX11L8A8MPP1 907 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 DGAT1O75907 488 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CSPG5O95196 566 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 ADH1AP07327 375 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 YWHABP31946 246 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 PBX3P40426 434 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 SLC11A1P49279 550 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 ANAPC15P60006 121 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CCT2P78371 535 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 DSG1Q02413 1049 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CREMQ03060 361 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 NCBP1Q09161 790 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 TDGQ13569 410 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 LETM2Q2VYF4 491 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 UBXN11Q5T124 520 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 KIAA0319Q5VV43 1072 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 LLGL2Q6P1M3 1020 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CCDC149Q6ZUS6 474 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 RTL10Q7L3V2 364 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 TRMT1LQ7Z2T5 733 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CABP7Q86V35 215 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 COLGALT2Q8IYK4 626 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 PRPF31Q8WWY3 499 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 WASF1Q92558 559 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 STAMQ92783 540 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 HAS1Q92839 578 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 PRIMPOLQ96LW4 560 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 RPS6KC1Q96S38 1066 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 HSD17B14Q9BPX1 270 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 RTP3Q9BQQ7 232 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 HERC2P3Q9BVR0 1158 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 VN1R3Q9BXE9 311 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 SEMA4AQ9H3S1 761 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 PLEKHA4Q9H4M7 779 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 MRPL17Q9NRX2 175 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CHST7Q9NS84 486 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 FNIP2Q9P278 1114 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 EPS15L1Q9UBC2 864 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 WNT16Q9UBV4 365 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 DBR1Q9UK59 544 aaKnown RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 DUSP12Q9UNI6 340 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 ZFP37Q9Y6Q3 630 aaPredicted RBP6.82□□□□□ -1.32
LSM3P4-201ENST00000502948 CCDC194A0A1B0GVG4 234 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NT5C1B-RDH14C9J2C7 533 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 EML1O00423 815 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NRP1O14786 923 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 SLC37A4O43826 429 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 GFRA3O60609 400 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 PFKFB2O60825 505 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 EIF5BO60841 1220 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NR1I2O75469 434 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 CSDE1O75534 798 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 DDHD2O94830 711 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 SLITRK3O94933 977 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 POU2F2P09086 479 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 CNPP09543 421 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 EPCAMP16422 314 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 AOC1P19801 751 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 FGFR4P22455 802 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 RNASELQ05823 741 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 LAMTOR4Q0VGL1 99 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 TFDP1Q14186 410 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 EMC2Q15006 297 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 INF2Q27J81 1249 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 RARS2Q5T160 578 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NOTUMQ6P988 496 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 ZBTB33Q86T24 672 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 ZNF280BQ86YH2 543 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 HACE1Q8IYU2 909 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms