RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 EXOC3O60645 756 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 DKC1O60832 514 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE4-202ENST00000502818 IQCF3P0C7M6 154 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 PNMA6AP0CW24 399 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-202ENST00000502818 SRGAP2CP0DJJ0 459 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 CNGA1P29973 690 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 TNFAIP2Q03169 654 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 PPP3CAQ08209 521 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 NCBP1Q09161 790 aaKnown RBP7.99□□□□□ -1.13
CPNE4-202ENST00000502818 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 FKBP15Q5T1M5 1219 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 REXO1L1PQ8IX06 675 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 ACRBPQ8NEB7 543 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 OR6J1Q8NGC5 347 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 PPP1R13BQ96KQ4 1090 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 CAPNS2Q96L46 248 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 PANX2Q96RD6 677 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 TIPINQ9BVW5 301 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 ABHD16BQ9H3Z7 469 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 MINDY3Q9H8M7 445 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 SIX2Q9NPC8 291 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 TOPORSQ9NS56 1045 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-202ENST00000502818 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE4-202ENST00000502818 DNAH12Q6ZR08 3092 aa7.99□□□□□ -1.13
CPNE4-202ENST00000502818 UBE4BO95155 1302 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 LOC102724159A0A0B4J2E5 919 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 IGKV6-21A0A0C4DH24 114 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 SLC16A3O15427 465 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 C22orf31O95567 290 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 HOXC6P09630 235 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 EPB41P11171 864 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 TRIM21P19474 475 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 FECHP22830 423 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 PSMC2P35998 433 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 PSMC4P43686 418 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 INHBEP58166 350 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 PRKCZQ05513 592 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 LAMTOR4Q0VGL1 99 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 PWP2Q15269 919 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 NFIL3Q16649 462 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 MARCH8Q5T0T0 291 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 HS2ST1Q7LGA3 356 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 CDR2LQ86X02 465 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 METTL13Q8N6R0 699 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 TRIB2Q92519 343 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 KAT2BQ92831 832 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 DNAJC7Q99615 494 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 TARS2Q9BW92 718 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 GANQ9H2C0 597 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 SMARCAD1Q9H4L7 1026 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 ZCCHC17Q9NP64 241 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 REXO2Q9Y3B8 237 aaKnown RBP7.98□□□□□ -1.13
CPNE4-202ENST00000502818 CEP350Q5VT06 3117 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 LOXHD1Q8IVV2 1947 aa7.98□□□□□ -1.13
CPNE4-202ENST00000502818 FAM170AA1A519 330 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 LRRC53A6NM62 1247 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 B4GALT5O43286 388 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 GNA14O95837 355 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 AFPP02771 609 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 RPL13P26373 211 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 KLRC1P26715 233 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 PON1P27169 355 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 RFC5P40937 340 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 SMTNP53814 917 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 RTP1P59025 263 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 POLR2FP61218 127 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 LACTBP83111 547 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 ZNF200P98182 395 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 DEFB115Q30KQ5 88 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 LMBRD2Q68DH5 695 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 EFCAB12Q6NXP0 572 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 RHPN2Q8IUC4 686 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 SLC9A9Q8IVB4 645 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 EMID1Q96A84 441 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 IFT74Q96LB3 600 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 TMEM206Q9H813 350 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 SUCLA2Q9P2R7 463 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 LUC7L2Q9Y383 392 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 FHOD1Q9Y613 1164 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 H3BRB1 525 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 HBP1O60381 514 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 STX10O60499 249 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 TRPA1O75762 1119 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 VTNP04004 478 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 NAMPTP43490 491 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 GCLMP48507 274 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 ACOT2P49753 483 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 FLT3LGP49771 235 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 NLRP11P59045 1033 aaKnown RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 BFSP1Q12934 665 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 TERF2Q15554 542 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 IQSEC1Q6DN90 963 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 CRELD2Q6UXH1 353 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-202ENST00000502818 STXBP4Q6ZWJ1 553 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 RRAGAQ7L523 313 aa7.97□□□□□ -1.13
CPNE4-202ENST00000502818 TLK2Q86UE8 772 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms