RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RNF207Q6ZRF8 634 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 PALB2Q86YC2 1186 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 SLC20A1Q8WUM9 679 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 TRERF1Q96PN7 1200 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 PFASO15067 1338 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 FGGP02679 453 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 MXI1P50539 228 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 SMTNP53814 917 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 TCEAL1Q15170 157 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 XKR9Q5GH70 373 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 FAM102BQ5T8I3 360 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 SRLQ86TD4 932 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 PXMP2Q9NR77 195 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 AMACRQ9UHK6 382 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 SCAF8Q9UPN6 1271 aaKnown RBP17.91■□□□□ 0.46
VCAN-204ENST00000502527 FTLP02792 175 aaPredicted RBP17.91■□□□□ 0.46
VCAN-204ENST00000502527 VCAM1P19320 739 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 MCCD1P59942 119 aaPredicted RBP17.91■□□□□ 0.46
VCAN-204ENST00000502527 GNGT1P63211 74 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 ARHGEF16Q5VV41 709 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 XRRA1Q6P2D8 792 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 LRIG3Q6UXM1 1119 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 RDM1Q8NG50 284 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 HVCN1Q96D96 273 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 SH2D3AQ9BRG2 576 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 TMEM117Q9H0C3 514 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 GPRC5CQ9NQ84 441 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 RSPH14Q9UHP6 348 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 COG5Q9UP83 839 aa17.91■□□□□ 0.46
VCAN-204ENST00000502527 RRP15Q9Y3B9 282 aaKnown RBP17.91■□□□□ 0.46
VCAN-204ENST00000502527 TMEM150BA6NC51 233 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 EIF3HO15372 352 aaKnown RBP eCLIP17.9■□□□□ 0.46
VCAN-204ENST00000502527 ATP9AO75110 1047 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 CCNE2O96020 404 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 DGKZQ13574 1117 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 MTMR2Q13614 643 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 RPUSD2Q8IZ73 545 aaKnown RBP17.9■□□□□ 0.46
VCAN-204ENST00000502527 PLEKHO2Q8TD55 490 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 JDP2Q8WYK2 163 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 RNPC3Q96LT9 517 aaKnown RBP17.9■□□□□ 0.46
VCAN-204ENST00000502527 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
VCAN-204ENST00000502527 PLAAQ9Y263 795 aa17.9■□□□□ 0.46
VCAN-204ENST00000502527 UTP11Q9Y3A2 253 aaKnown RBP17.9■□□□□ 0.46
VCAN-204ENST00000502527 GOLGA6L10A0A0M3HER8 536 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 TESPA1A2RU30 521 aaPredicted RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 RTN2O75298 545 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 ZNF280AP59817 542 aaPredicted RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 GPC5P78333 572 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 C11orf63Q6NUN7 778 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 NSMFQ6X4W1 530 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 DDX42Q86XP3 938 aaKnown RBP eCLIP17.89■□□□□ 0.45
VCAN-204ENST00000502527 SEC14L1Q92503 715 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 TSPYL1Q9H0U9 437 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 FAM114A2Q9NRY5 505 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 TBX20Q9UMR3 447 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 GOLGA6L10A6NI86 522 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 CCDC169A6NNP5 214 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 MIF4GDA9UHW6 222 aaKnown RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 HMGB1P1B2RPK0 211 aaPredicted RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 TTI1O43156 1089 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 USP8P40818 1118 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 PRPF4BQ13523 1007 aaKnown RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 SNRNP35Q16560 246 aaKnown RBP17.89■□□□□ 0.45
VCAN-204ENST00000502527 DCAF12L1Q5VU92 463 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 PLA2G4FQ68DD2 849 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 KCTD16Q68DU8 428 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 TMEM161BQ8NDZ6 487 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 ZSWIM2Q8NEG5 633 aa17.89■□□□□ 0.45
VCAN-204ENST00000502527 VWA5AO00534 786 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 DAPK3O43293 454 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 ADRB2P07550 413 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 CCND2P30279 289 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 HSD17B3P37058 310 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 MFAP3P55082 362 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 PTENP60484 403 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 POU5F1Q01860 360 aaKnown RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 DMP1Q13316 513 aaPredicted RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 MTMR3Q13615 1198 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 DNAJC21Q5F1R6 531 aaKnown RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 EMC10Q5UCC4 262 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 ZNF746Q6NUN9 644 aaPredicted RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 OTUD6AQ7L8S5 288 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 TRMT1LQ7Z2T5 733 aaKnown RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 NLRX1Q86UT6 975 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 MAP4K3Q8IVH8 894 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 FAM71AQ8IYT1 594 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 SH2D3CQ8N5H7 860 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 UBL4BQ8N7F7 174 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 ATP6V1G3Q96LB4 118 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 MOV10L1Q9BXT6 1211 aaKnown RBP17.88■□□□□ 0.45
VCAN-204ENST00000502527 ALG6Q9Y672 507 aa17.88■□□□□ 0.45
VCAN-204ENST00000502527 GOLGA8IPA6NC78 632 aa17.87■□□□□ 0.45
VCAN-204ENST00000502527 GOLGA8JA6NMD2 632 aa17.87■□□□□ 0.45
VCAN-204ENST00000502527 MYO1CO00159 1063 aa17.87■□□□□ 0.45
VCAN-204ENST00000502527 GZMAP12544 262 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms