RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 PRPF4BQ13523 1007 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ALCAMQ13740 583 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ZNF746Q6NUN9 644 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 HAUS6Q7Z4H7 955 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 XXYLT1Q8NBI6 393 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TMEM174Q8WUU8 243 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 SEC14L1Q92503 715 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TRIM51Q9BSJ1 452 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ERVK-5Q9HDB9 667 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.66□□□□□ -0.73e-9■■■■■ 64.1
CLIP1-204ENST00000501271 ARID2Q68CP9 1835 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 KIAA1217Q5T5P2 1943 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 DOCK5Q9H7D0 1870 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 WDR46O15213 610 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ATP9AO75110 1047 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 LYPLA2O95372 231 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 PEX3P56589 373 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 RPS6P62753 249 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 GTF2BQ00403 316 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 GUCY1A3Q02108 690 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 PLA2G4FQ68DD2 849 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 MCF2L2Q86YR7 1114 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 RPUSD2Q8IZ73 545 aaKnown RBP10.66□□□□□ -0.7
CLIP1-204ENST00000501271 CCDC26Q8TAB7 109 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TMEM117Q9H0C3 514 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 CARD9Q9H257 536 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 RASSF4Q9H2L5 321 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TMBIM4Q9HC24 238 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 GOLGA8IPA6NC78 632 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 GOLGA8JA6NMD2 632 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 FTLP02792 175 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-204ENST00000501271 CORO7P57737 925 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 PTENP60484 403 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 ZNF844Q08AG5 666 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 PGM5Q15124 567 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 EMC10Q5UCC4 262 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 AADACL2Q6P093 401 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 LRIG3Q6UXM1 1119 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 C1orf131Q8NDD1 294 aaKnown RBP10.65□□□□□ -0.7
CLIP1-204ENST00000501271 AGBL3Q8NEM8 1001 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 ATP8B4Q8TF62 1192 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 LRRC45Q96CN5 670 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 TSPYL1Q9H0U9 437 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
CLIP1-204ENST00000501271 CHORDC1Q9UHD1 332 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-204ENST00000501271 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-204ENST00000501271 HMGB1P1B2RPK0 211 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 P4HA2O15460 535 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 SGPL1O95470 568 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 CCNE2O96020 404 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 MYCLP12524 364 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 VCAM1P19320 739 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 KCNA3P22001 575 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 USP8P40818 1118 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 MARCKSL1P49006 195 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 MXI1P50539 228 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 HADHBP55084 474 aaKnown RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 NCKAP1LP55160 1127 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 CETN1Q12798 172 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 TMC3Q7Z5M5 1100 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 NOP9Q86U38 636 aaKnown RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 RHOT2Q8IXI1 618 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 EPS8L1Q8TE68 723 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 UBLCP1Q8WVY7 318 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 KRT35Q92764 455 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 KREMEN1Q96MU8 473 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 PCDHB18PQ96TA0 734 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 KIFC3Q9BVG8 833 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 TRIM31Q9BZY9 425 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 ST6GALNAC4Q9H4F1 302 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 ZNRF3Q9ULT6 936 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 DIS3Q9Y2L1 958 aaKnown RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 UTP11Q9Y3A2 253 aaKnown RBP10.65□□□□□ -0.71
CLIP1-204ENST00000501271 ALG6Q9Y672 507 aa10.65□□□□□ -0.71
CLIP1-204ENST00000501271 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-204ENST00000501271 ZEB2O60315 1214 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 CHRNB2P17787 502 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 ADSSP30520 456 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 LSP1P33241 339 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 CXCL9Q07325 125 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 RASA3Q14644 834 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 ZNF772Q68DY9 489 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-204ENST00000501271 C11orf63Q6NUN7 778 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 CBWD2Q8IUF1 395 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 C4orf19Q8IY42 314 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 NIM1KQ8IY84 436 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 LPAR1Q92633 364 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 SEMA4DQ92854 862 aa10.64□□□□□ -0.71
CLIP1-204ENST00000501271 SAAL1Q96ER3 474 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms