RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 WDR6Q9NNW5 1121 aaKnown RBP10.27□□□□□ -0.77
CCDC171-209ENST00000498725 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 CHST12Q9NRB3 414 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 SUCLA2Q9P2R7 463 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-209ENST00000498725 DOCK6Q96HP0 2047 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 KLF18A0A0U1RQI7 1052 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 TEX28O15482 410 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 GAS7O60861 476 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
CCDC171-209ENST00000498725 SKIP12755 728 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 GLULP15104 373 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 CDC27P30260 824 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 OR1G1P47890 313 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 AAMPQ13685 434 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 AGMOQ6ZNB7 445 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
CCDC171-209ENST00000498725 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-209ENST00000498725 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 STAMQ92783 540 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 LSG1Q9H089 658 aaKnown RBP10.26□□□□□ -0.77
CCDC171-209ENST00000498725 GLT8D2Q9H1C3 349 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
CCDC171-209ENST00000498725 F8W810 466 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 MSH4O15457 936 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 LILRB3O75022 631 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 GLUD1P00367 558 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 SOD2P04179 222 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 ADH1AP07327 375 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 RAB27AP51159 221 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
CCDC171-209ENST00000498725 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 LRCH2Q5VUJ6 765 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 MIER3Q7Z3K6 550 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 SUMF1Q8NBK3 374 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 PJA1Q8NG27 643 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 RPS6KC1Q96S38 1066 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 RPP25Q9BUL9 199 aaKnown RBP10.25□□□□□ -0.77
CCDC171-209ENST00000498725 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 TEKT3Q9BXF9 490 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-209ENST00000498725 RSAD1Q9HA92 442 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 C6orf50Q9HD87 102 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-209ENST00000498725 SPATA6Q9NWH7 488 aaPredicted RBP10.25□□□□□ -0.77
CCDC171-209ENST00000498725 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 DLGAP2Q9P1A6 1054 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 EPS15L1Q9UBC2 864 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 NUMBLQ9Y6R0 609 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 ARID2Q68CP9 1835 aa10.25□□□□□ -0.77
CCDC171-209ENST00000498725 CACNA1IQ9P0X4 2223 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 CARNS1A5YM72 827 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 LAMTOR5O43504 91 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 LAMP2P13473 410 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 RPL17P18621 184 aaKnown RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 CD72P21854 359 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 GLUD2P49448 558 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 GPC5P78333 572 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 CSTF1Q05048 431 aaKnown RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 TARBP2Q15633 366 aaKnown RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 PLA2G4FQ68DD2 849 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 CMASQ8NFW8 434 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 RABGGTAQ92696 567 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 PHKBQ93100 1093 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 LENG9Q96B70 501 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 HERC2P3Q9BVR0 1158 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 MARCH5Q9NX47 278 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 USP18Q9UMW8 372 aa10.24□□□□□ -0.77
CCDC171-209ENST00000498725 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-209ENST00000498725 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
CCDC171-209ENST00000498725 ZNF623O75123 536 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 SFNP31947 248 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 JAK3P52333 1124 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 NTHL1P78549 312 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 HTR4Q13639 388 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 NECTIN1Q15223 517 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 XKR3Q5GH77 459 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 TSSK4Q6SA08 328 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 PARM1Q6UWI2 310 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 MAML2Q8IZL2 1156 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms