RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 MED8Q96G25 268 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 WBP1Q96G27 269 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 VN1R3Q9BXE9 311 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 DOCK9Q9BZ29 2069 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 ADAMTS10Q9H324 1103 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 SPG21Q9NZD8 308 aa5.61□□□□□ -1.51
CSTF1-207ENST00000498689 ADD3Q9UEY8 706 aaKnown RBP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 PLEKHB1Q9UF11 243 aaPredicted RBP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 PA2G4Q9UQ80 394 aaKnown RBP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 MRPS17Q9Y2R5 130 aaKnown RBP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 PRRC2CQ9Y520 2896 aaKnown RBP5.61□□□□□ -1.51
CSTF1-207ENST00000498689 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CYP2D7A0A087X1C5 515 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 EXTL3O43909 919 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 B4GALT3O60512 393 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 SPATA31D3P0C874 917 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CYP7A1P22680 504 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CALML3P27482 149 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 ARID4AP29374 1257 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 GCGRP47871 477 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 SARSP49591 514 aaKnown RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 GNAI1P63096 354 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 ADAM17P78536 824 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 NTHL1P78549 312 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 PFKPQ01813 784 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 NFX1Q12986 1120 aaKnown RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TRIP6Q15654 476 aaKnown RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 PKN3Q6P5Z2 889 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 LRRC69Q6ZNQ3 347 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 SPATA31D4Q6ZUB0 917 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TOGARAM2Q6ZUX3 1019 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TMPRSS7Q7RTY8 843 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TMEM87AQ8NBN3 555 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CMASQ8NFW8 434 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 BCL7CQ8WUZ0 217 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 ZBTB10Q96DT7 871 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 ZNF558Q96NG5 402 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CASD1Q96PB1 797 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 REPIN1Q9BWE0 567 aaKnown RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 POLMQ9NP87 494 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 ATP13A2Q9NQ11 1180 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 PIH1D3Q9NQM4 214 aaKnown RBP5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TCP11L1Q9NUJ3 509 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 RNF19AQ9NV58 838 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 MCM9Q9NXL9 1143 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 PADI3Q9ULW8 664 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 PCDHB7Q9Y5E2 793 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 CDY2AQ9Y6F7 541 aa5.6□□□□□ -1.51
CSTF1-207ENST00000498689 TDRD15B5MCY1 1934 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 J3QL48 77 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 ALDH1L1O75891 902 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 AFPP02771 609 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 C8AP07357 584 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 CNPP09543 421 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 CTSAP10619 480 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 CD59P13987 128 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 SNRPBP14678 240 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 ENGP17813 658 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 KLRC2P26717 231 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 METAP2P50579 478 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 TLE3Q04726 772 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 TMEM266Q2M3C6 531 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 TWISTNBQ3B726 338 aaPredicted RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 TKFCQ3LXA3 575 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 SYDE2Q5VT97 1194 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 BRICD5Q6PL45 260 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 ZC3H18Q86VM9 953 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 PPTC7Q8NI37 304 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 SNIP1Q8TAD8 396 aaKnown RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 LMBR1Q8WVP7 490 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 FAM3CQ92520 227 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 PHF20Q9BVI0 1012 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 FAM117AQ9C073 453 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 SRCIN1Q9C0H9 1055 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 KANSL2Q9H9L4 492 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 LRRC4CQ9HCJ2 640 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 STK17AQ9UEE5 414 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 FEM1BQ9UK73 627 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 INVSQ9Y283 1065 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 HEMK1Q9Y5R4 338 aaPredicted RBP5.59□□□□□ -1.51
CSTF1-207ENST00000498689 IRAK3Q9Y616 596 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 CCDC168Q8NDH2 2452 aa5.59□□□□□ -1.51
CSTF1-207ENST00000498689 ZNF469Q96JG9 3925 aaPredicted RBP5.59□□□□□ -1.52
CSTF1-207ENST00000498689 TMEM232C9JQI7 657 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 H3BRB1 525 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 WNT7AO00755 349 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 SH3BP5O60239 455 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 CIAO1O76071 339 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 SSBP05455 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSTF1-207ENST00000498689 BMP3P12645 472 aa5.58□□□□□ -1.52
CSTF1-207ENST00000498689 HOXB4P17483 251 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms