RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DTWD2Q8NBA8 298 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 KCNB2Q92953 911 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 MINDY3Q9H8M7 445 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 MRPL17Q9NRX2 175 aaKnown RBP16.48■□□□□ 0.23
TRAF4-212ENST00000498540 MARCH5Q9NX47 278 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 COL4A3BPQ9Y5P4 624 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 SNX14Q9Y5W7 946 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 DOCK8Q8NF50 2099 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 ZNF292O60281 2723 aa16.48■□□□□ 0.23
TRAF4-212ENST00000498540 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 EML1O00423 815 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 NRP1O14786 923 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 CDC45O75419 566 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 POMCP01189 267 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 NPEPPSP55786 919 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 PSMC5P62195 406 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
TRAF4-212ENST00000498540 UBXN11Q5T124 520 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
TRAF4-212ENST00000498540 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
TRAF4-212ENST00000498540 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 FAM193BQ96PV7 902 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-212ENST00000498540 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 TMEM175Q9BSA9 504 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 IGSF9Q9P2J2 1179 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 STK39Q9UEW8 545 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 FAN1Q9Y2M0 1017 aa16.47■□□□□ 0.23
TRAF4-212ENST00000498540 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 KRBA1A5PL33 1030 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 M0R2N6 131 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 SOD2P04179 222 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 ALDH2P05091 517 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 URODP06132 367 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 CFHP08603 1231 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 MYBP10242 640 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 HOXA11P31270 313 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 ID4P47928 161 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 AK2P54819 239 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 TAS1R1Q7RTX1 841 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 JPH2Q9BR39 696 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
TRAF4-212ENST00000498540 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 WRAP73Q9P2S5 460 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
TRAF4-212ENST00000498540 CACNA1AO00555 2505 aa16.46■□□□□ 0.22
TRAF4-212ENST00000498540 CLUHO75153 1309 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 CCDC195A0A1B0GUA6 201 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 TEX28O15482 410 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 SLC37A4O43826 429 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 RFPL2O75678 378 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 GBP2P32456 591 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 HSPA4P34932 840 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 NPY5RQ15761 445 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 ERMP1Q7Z2K6 904 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 SMG8Q8ND04 991 aaKnown RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 RPS6KC1Q96S38 1066 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 WDR6Q9NNW5 1121 aaKnown RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 KANSL3Q9P2N6 904 aa16.45■□□□□ 0.22
TRAF4-212ENST00000498540 MTCL1Q9Y4B5 1905 aaKnown RBP16.45■□□□□ 0.22
TRAF4-212ENST00000498540 DMXL1Q9Y485 3027 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 F8W810 466 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 INPPL1O15357 1258 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 EFEMP2O95967 443 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 GLUD1P00367 558 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 ADH1AP07327 375 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 MOXD1Q6UVY6 613 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 RNF168Q8IYW5 571 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 BLIDQ8IZY5 108 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 CEP170P1Q96L14 293 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 MYADMQ96S97 322 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 DHX33Q9H6R0 707 aaKnown RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
TRAF4-212ENST00000498540 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 CA14Q9ULX7 337 aa16.44■□□□□ 0.22
TRAF4-212ENST00000498540 STK25O00506 426 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 OR1G1P47890 313 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 QARSP47897 775 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms