RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ADH1AP07327 375 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 SFPQP23246 707 aaKnown RBP eCLIP18.57■□□□□ 0.56
VIM-208ENST00000497849 AK2P54819 239 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 SETQ01105 290 aaPredicted RBP18.57■□□□□ 0.56
VIM-208ENST00000497849 AAMPQ13685 434 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 TMEM175Q9BSA9 504 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 RPP25Q9BUL9 199 aaKnown RBP18.57■□□□□ 0.56
VIM-208ENST00000497849 MARCH5Q9NX47 278 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 NUMBLQ9Y6R0 609 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 WDR64B1ANS9 1081 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 hCG_1984214I3L0E3 225 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 SPTLC1O15269 473 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 EFEMP2O95967 443 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 GLUD1P00367 558 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 ALDH2P05091 517 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 URODP06132 367 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 SDHBP21912 280 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 RAB27AP51159 221 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 KIAA0319Q5VV43 1072 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 RNF168Q8IYW5 571 aaPredicted RBP18.56■□□□□ 0.56
VIM-208ENST00000497849 ZNF713Q8N859 430 aaPredicted RBP18.56■□□□□ 0.56
VIM-208ENST00000497849 LENG9Q96B70 501 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 HERC2P3Q9BVR0 1158 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 GLT8D2Q9H1C3 349 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 RXFP1Q9HBX9 757 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 DISC1Q9NRI5 854 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.56■□□□□ 0.56
VIM-208ENST00000497849 TCEAL9Q9UHQ7 104 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 FBXO4Q9UKT5 387 aa18.56■□□□□ 0.56
VIM-208ENST00000497849 IGKV6-21A0A0C4DH24 114 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 SPATA31D3P0C874 917 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 TGM1P22735 817 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 GPC5P78333 572 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 ST3GAL2Q16842 350 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 PRR16Q569H4 304 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 SPATA31D4Q6ZUB0 917 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 GET4Q7L5D6 327 aaPredicted RBP18.55■□□□□ 0.56
VIM-208ENST00000497849 GPR161Q8N6U8 529 aaKnown RBP18.55■□□□□ 0.56
VIM-208ENST00000497849 URGCPQ8TCY9 931 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 PGBD4Q96DM1 585 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 BORCS6Q96GS4 357 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 DDX23Q9BUQ8 820 aaKnown RBP18.55■□□□□ 0.56
VIM-208ENST00000497849 NT5C3AQ9H0P0 336 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 DPP7Q9UHL4 492 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 PCDHB2Q9Y5E7 798 aa18.55■□□□□ 0.56
VIM-208ENST00000497849 DCDC2BA2VCK2 349 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 MRPL10Q7Z7H8 261 aaKnown RBP18.54■□□□□ 0.56
VIM-208ENST00000497849 ZBTB44Q8NCP5 570 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 FGF14Q92915 247 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 RSAD1Q9HA92 442 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 RBM28Q9NW13 759 aaKnown RBP18.54■□□□□ 0.56
VIM-208ENST00000497849 SPATA6Q9NWH7 488 aaPredicted RBP18.54■□□□□ 0.56
VIM-208ENST00000497849 SSX2IPQ9Y2D8 614 aa18.54■□□□□ 0.56
VIM-208ENST00000497849 MTF2Q9Y483 593 aaPredicted RBP18.54■□□□□ 0.56
VIM-208ENST00000497849 KANSL1LA0AUZ9 987 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 TMEM150BA6NC51 233 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 PRR5-ARHGAP8B1AHC4 643 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 LAMTOR5O43504 91 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 STBD1O95210 358 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 POMCP01189 267 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 CIITAP33076 1130 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 GLUD2P49448 558 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 ARHGAP8P85298 464 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 LMNB2Q03252 620 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 MTERF2Q49AM1 385 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 CATSPER4Q7RTX7 472 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 ZNF410Q86VK4 478 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 KSR1Q8IVT5 923 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 HDAC7Q8WUI4 952 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 SHDQ96IW2 340 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 SH2D3AQ9BRG2 576 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 NIFKQ9BYG3 293 aaKnown RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 BCO2Q9BYV7 579 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 INO80BQ9C086 356 aaPredicted RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 PIDD1Q9HB75 910 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 KANSL3Q9P2N6 904 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 CDV3Q9UKY7 258 aaKnown RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 PRG3Q9Y2Y8 225 aaPredicted RBP18.53■□□□□ 0.56
VIM-208ENST00000497849 PCDHGA2Q9Y5H1 932 aa18.53■□□□□ 0.56
VIM-208ENST00000497849 SLC27A2O14975 620 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 EDIL3O43854 480 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 LILRB5O75023 590 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 ADRB1P08588 477 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 CSTF1Q05048 431 aaKnown RBP18.52■□□□□ 0.56
VIM-208ENST00000497849 RTN1Q16799 776 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 PARM1Q6UWI2 310 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 PALB2Q86YC2 1186 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 RHPN2Q8IUC4 686 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 ATRIPQ8WXE1 791 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 NELL1Q92832 810 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 RTKNQ9BST9 563 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 PRKD2Q9BZL6 878 aa18.52■□□□□ 0.56
VIM-208ENST00000497849 EPC1Q9H2F5 836 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms