RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	GSDMA	Q96QA5	445 aa		16.35	■□□□□ 0.21
UMPS-209	ENST00000497791	ERVK-5	Q9HDB9	667 aa		16.35	■□□□□ 0.21
UMPS-209	ENST00000497791	PTPRS	Q13332	1948 aa		16.35	■□□□□ 0.21
UMPS-209	ENST00000497791		K7ERI5	159 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	TSPAN1	O60635	241 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	CXCL10	P02778	98 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	HOXA11	P31270	313 aa	Predicted RBP	16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	GTF2B	Q00403	316 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	CDC42EP1	Q00587	391 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	NFX1	Q12986	1120 aa	Known RBP	16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	MORC3	Q14149	939 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	CATSPER4	Q7RTX7	472 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	IFIH1	Q9BYX4	1025 aa	Known RBP	16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	PRKAG2	Q9UGJ0	569 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	TBX20	Q9UMR3	447 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	ZMYM2	Q9UBW7	1377 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	CD44	P16070	742 aa	Known RBP	16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	PAK2	Q13177	524 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	MAPK6	Q16659	721 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	PLEKHG4	Q58EX7	1191 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	C16orf59	Q7L2K0	433 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	NELFCD	Q8IXH7	590 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	DBF4B	Q8NFT6	615 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	LINC01599	Q8WXQ3	324 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	C2orf40	Q9H1Z8	148 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	ST6GALNAC4	Q9H4F1	302 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	TMEM134	Q9H6X4	195 aa		16.34	■□□□□ 0.21
UMPS-209	ENST00000497791	PHLPP2	Q6ZVD8	1323 aa		16.33	■□□□□ 0.21
UMPS-209	ENST00000497791	TTC3	P53804	2025 aa		16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	ARF4	P18085	180 aa	Predicted RBP	16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	EFNA5	P52803	228 aa		16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	FAM187B	Q17R55	369 aa		16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	SLC39A4	Q6P5W5	647 aa		16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	ZNF710	Q8N1W2	664 aa		16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	ZBTB45	Q96K62	511 aa	Predicted RBP	16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	TARS2	Q9BW92	718 aa	Known RBP	16.33	■□□□□ 0.2
UMPS-209	ENST00000497791	ANKRD63	C9JTQ0	380 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	ACKR2	O00590	384 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	PRCP	P42785	496 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	PSMD2	Q13200	908 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	L1TD1	Q5T7N2	865 aa	Known RBP	16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	ZNF658	Q5TYW1	1059 aa	Predicted RBP	16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	EEF1DP3	Q658K8	133 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	RTN4RL1	Q86UN2	441 aa	Predicted RBP	16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	MAP4K3	Q8IVH8	894 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	ZNF507	Q8TCN5	953 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	KCNN1	Q92952	543 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	HAPLN2	Q9GZV7	340 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	AGPAT5	Q9NUQ2	364 aa		16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	PRMT7	Q9NVM4	692 aa	Predicted RBP	16.32	■□□□□ 0.2
UMPS-209	ENST00000497791	PIN4	Q9Y237	131 aa	Known RBP	16.32	■□□□□ 0.2
UMPS-209	ENST00000497791		H0YGN5	161 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	ERLIN2	O94905	339 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	SFPQ	P23246	707 aa	Known RBP eCLIP	16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	PRPF4B	Q13523	1007 aa	Known RBP	16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	SKOR2	Q2VWA4	1001 aa	Predicted RBP	16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	TMEM199	Q8N511	208 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	ACO2	Q99798	780 aa	Known RBP	16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	RMND1	Q9NWS8	449 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	PCDHB13	Q9Y5F0	798 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	SQOR	Q9Y6N5	450 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	CNTNAP2	Q9UHC6	1331 aa		16.31	■□□□□ 0.2
UMPS-209	ENST00000497791	CIT	O14578	2027 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	ABLIM1	O14639	778 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	GPR182	O15218	404 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	EIF3D	O15371	548 aa	Known RBP eCLIP	16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	MAGEA10	P43363	369 aa	Predicted RBP	16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	FPGS	Q05932	587 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	DSC3	Q14574	896 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	BMT2	Q1RMZ1	405 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	DPCR1	Q3MIW9	517 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	USP38	Q8NB14	1042 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	CCDC47	Q96A33	483 aa	Known RBP	16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	EIF2A	Q9BY44	585 aa	Known RBP	16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	PDZD7	Q9H5P4	517 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	KCNG1	Q9UIX4	513 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	PPP1R3G	B7ZBB8	358 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	TGFB1I1	O43294	461 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	RFC2	P35250	354 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	STRN3	Q13033	797 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	UBXN11	Q5T124	520 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	ATF7IP2	Q5U623	682 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	MYOCD	Q8IZQ8	938 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	SLC17A8	Q8NDX2	589 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	ZSWIM2	Q8NEG5	633 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	PRIMPOL	Q96LW4	560 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	ACCS	Q96QU6	501 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	KCTD10	Q9H3F6	313 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	IL23A	Q9NPF7	189 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	NR2E3	Q9Y5X4	410 aa		16.3	■□□□□ 0.2
UMPS-209	ENST00000497791	ANK1	P16157	1881 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	SYCE3	A1L190	88 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791		H0YCG3	227 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	IBSP	P21815	317 aa	Predicted RBP	16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	ADSS	P30520	456 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	ZSCAN23	Q3MJ62	389 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	ZNF365	Q70YC5	407 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	ADSSL1	Q8N142	457 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	SEPT8	Q92599	483 aa		16.29	■□□□□ 0.2
UMPS-209	ENST00000497791	HVCN1	Q96D96	273 aa		16.29	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms