RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 OTOP3Q7RTS5 596 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 TRIM22Q8IYM9 498 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 URGCPQ8TCY9 931 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 PRPF31Q8WWY3 499 aaKnown RBP24.37■■□□□ 1.49
CLIC4-204ENST00000497755 MINDY3Q9H8M7 445 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 STK39Q9UEW8 545 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 DDX25Q9UHL0 483 aaKnown RBP24.37■■□□□ 1.49
CLIC4-204ENST00000497755 FAN1Q9Y2M0 1017 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 COL4A3BPQ9Y5P4 624 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 WDR87Q6ZQQ6 2873 aa24.37■■□□□ 1.49
CLIC4-204ENST00000497755 C2orf16Q68DN1 1984 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 PI15O43692 258 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 QARSP47897 775 aaKnown RBP24.36■■□□□ 1.49
CLIC4-204ENST00000497755 TDGQ13569 410 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 TOB2Q14106 344 aaPredicted RBP24.36■■□□□ 1.49
CLIC4-204ENST00000497755 CWF19L1Q69YN2 538 aaKnown RBP24.36■■□□□ 1.49
CLIC4-204ENST00000497755 CCDC149Q6ZUS6 474 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 DAGLBQ8NCG7 672 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 FLCNQ8NFG4 579 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 TMEM175Q9BSA9 504 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 RSAD1Q9HA92 442 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 KCNK12Q9HB15 430 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 KANSL3Q9P2N6 904 aa24.36■■□□□ 1.49
CLIC4-204ENST00000497755 GVINP1Q7Z2Y8 2422 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 NRP1O14786 923 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 SLC37A4O43826 429 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 SRGAP2CP0DJJ0 459 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 SRGAP1Q7Z6B7 1085 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 TMEM143Q96AN5 459 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 AIFM3Q96NN9 605 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 DHX33Q9H6R0 707 aaKnown RBP24.35■■□□□ 1.49
CLIC4-204ENST00000497755 MRPL17Q9NRX2 175 aaKnown RBP24.35■■□□□ 1.49
CLIC4-204ENST00000497755 WRAP73Q9P2S5 460 aaPredicted RBP24.35■■□□□ 1.49
CLIC4-204ENST00000497755 VAV3Q9UKW4 847 aa24.35■■□□□ 1.49
CLIC4-204ENST00000497755 DCHS1Q96JQ0 3298 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 SPDYE4A6NLX3 237 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 DEXIO95424 95 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 POMCP01189 267 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 PPP2R5CQ13362 524 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 NONOQ15233 471 aaKnown RBP eCLIP24.34■■□□□ 1.49
CLIC4-204ENST00000497755 INF2Q27J81 1249 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 LETM2Q2VYF4 491 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 C15orf39Q6ZRI6 1047 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 TAS1R1Q7RTX1 841 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 FRMD5Q7Z6J6 570 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 SLC7A3Q8WY07 619 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 CEP170P1Q96L14 293 aa24.34■■□□□ 1.49
CLIC4-204ENST00000497755 FAM193BQ96PV7 902 aaPredicted RBP24.34■■□□□ 1.49
CLIC4-204ENST00000497755 AOC1P19801 751 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 LAMTOR4Q0VGL1 99 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 GALNT17Q6IS24 598 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 RUFY3Q7L099 469 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 PSPC1Q8WXF1 523 aaKnown RBP24.33■■□□□ 1.49
CLIC4-204ENST00000497755 KCNMB3Q9NPA1 279 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 DUSP12Q9UNI6 340 aa24.33■■□□□ 1.49
CLIC4-204ENST00000497755 CNTNAP2Q9UHC6 1331 aa24.33■■□□□ 1.48
CLIC4-204ENST00000497755 C2CD2LO14523 706 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 N4BP1O75113 896 aaKnown RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 SOD2P04179 222 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 P4HBP07237 508 aaKnown RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 NCLP19338 710 aaKnown RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 EXOC8Q8IYI6 725 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 SMG8Q8ND04 991 aaKnown RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 CMASQ8NFW8 434 aaPredicted RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 FAM20AQ96MK3 541 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 RPS6KC1Q96S38 1066 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 LARP6Q9BRS8 491 aaKnown RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
CLIC4-204ENST00000497755 ZSWIM6Q9HCJ5 1215 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 MARCH5Q9NX47 278 aa24.32■■□□□ 1.48
CLIC4-204ENST00000497755 EP300Q09472 2414 aaPredicted RBP24.31■■□□□ 1.48
CLIC4-204ENST00000497755 DKC1O60832 514 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLIC4-204ENST00000497755 EFEMP2O95967 443 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 RFC5P40937 340 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 KRT25Q7Z3Z0 450 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 COLGALT2Q8IYK4 626 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 FAM177A1Q8N128 213 aaPredicted RBP24.31■■□□□ 1.48
CLIC4-204ENST00000497755 NKD2Q969F2 451 aaPredicted RBP24.31■■□□□ 1.48
CLIC4-204ENST00000497755 ZNF274Q96GC6 653 aaPredicted RBP24.31■■□□□ 1.48
CLIC4-204ENST00000497755 IGSF9Q9P2J2 1179 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 KCNJ14Q9UNX9 436 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 PPME1Q9Y570 386 aa24.31■■□□□ 1.48
CLIC4-204ENST00000497755 CPLX1O14810 134 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 TEX28O15482 410 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 AK2P54819 239 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 KIAA0319Q5VV43 1072 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 C4orf19Q8IY42 314 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 CCDC105Q8IYK2 499 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 SIX5Q8N196 739 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 HAS1Q92839 578 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 RNF39Q9H2S5 420 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 UBN1Q9NPG3 1134 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 MAN1C1Q9NR34 630 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 BMP2KQ9NSY1 1161 aaPredicted RBP24.3■■□□□ 1.48
CLIC4-204ENST00000497755 FBXL21Q9UKT6 434 aa24.3■■□□□ 1.48
CLIC4-204ENST00000497755 PRG3Q9Y2Y8 225 aaPredicted RBP24.3■■□□□ 1.48
CLIC4-204ENST00000497755 CCDC195A0A1B0GUA6 201 aa24.29■■□□□ 1.48
CLIC4-204ENST00000497755 ASAP2O43150 1006 aa24.29■■□□□ 1.48
CLIC4-204ENST00000497755 NARSO43776 548 aaKnown RBP24.29■■□□□ 1.48
CLIC4-204ENST00000497755 URODP06132 367 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms