RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 SLC26A4O43511 780 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 TRAK2O60296 914 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 MBD3O95983 291 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 NAMPTP43490 491 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 MAPK7Q13164 816 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 CABP7Q86V35 215 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 SYT2Q8N9I0 419 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 EIF2AQ9BY44 585 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 CCDC113Q9H0I3 377 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 NT5C3AQ9H0P0 336 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 CSRNP2Q9H175 543 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 REV3LO60673 3130 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 LAG3P18627 525 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 SLC12A3P55017 1021 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 NOTUMQ6P988 496 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 KIFC3Q9BVG8 833 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 AAASQ9NRG9 546 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 PCDHB12Q9Y5F1 795 aa17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 MORC2Q9Y6X9 1032 aaPredicted RBP17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 SPTBN5Q9NRC6 3674 aaKnown RBP17.64■□□□□ 0.41
CTDSP1-214ENST00000497677 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 HIP1RO75146 1068 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 FGF18O76093 207 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 GUCY2CP25092 1073 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 UBA7P41226 1012 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 AFF1P51825 1210 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 DNM1Q05193 864 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 NCBP1Q09161 790 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 COL19A1Q14993 1142 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 PPP2R5AQ15172 486 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 SKIV2LQ15477 1246 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 KLHL40Q2TBA0 621 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 TIGD5Q53EQ6 642 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 TCEAL5Q5H9L2 206 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 NOMO2Q5JPE7 1267 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 SPOUT1Q5T280 376 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 KCNT2Q6UVM3 1135 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 GLB1LQ6UWU2 654 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 RSPH1Q8WYR4 309 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 PGBD4Q96DM1 585 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 CCSER1Q9C0I3 900 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 C2orf40Q9H1Z8 148 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 BLOC1S4Q9NUP1 217 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 PRMT7Q9NVM4 692 aaPredicted RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 USP20Q9Y2K6 914 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 IPPQ9Y573 584 aa17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-214ENST00000497677 COL4A4P53420 1690 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 EDN1P05305 212 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 PLA2G4BP0C869 781 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 IRS1P35568 1242 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 PBX3P40426 434 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 NPTX2P47972 431 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 TFF2Q03403 129 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 SLC39A14Q15043 492 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 ARSHQ5FYA8 562 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 CDR2LQ86X02 465 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 ZBTB8OSQ8IWT0 167 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 HLA-CQ95604 372 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 IFT74Q96LB3 600 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 ASB2Q96Q27 587 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 TBC1D13Q9NVG8 400 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 COG5Q9UP83 839 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 HES2Q9Y543 173 aa17.62■□□□□ 0.41
CTDSP1-214ENST00000497677 XIRP2A4UGR9 3374 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 VCANP13611 3396 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 ACKR2O00590 384 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 INPPL1O15357 1258 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 B4GALT3O60512 393 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 PEX3P56589 373 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 UBE2HP62256 183 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 MRPS5P82675 430 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms