RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	ALG6	Q9Y672	507 aa		11.38	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SLC37A4	O43826	429 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SERPINB3	P29508	390 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	STAT3	P40763	770 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PTEN	P60484	403 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SGO2	Q562F6	1265 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DSTYK	Q6XUX3	929 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RAD54L	Q92698	747 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	UTP4	Q969X6	686 aa	Known RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RUNDC3B	Q96NL0	473 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	TMEM59L	Q9UK28	342 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RPTOR	Q8N122	1335 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	IGSF9B	Q9UPX0	1349 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CLDN3	O15551	220 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SETSIP	P0DME0	302 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MARK3	P27448	753 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	GNAQ	P50148	359 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	COG7	P83436	770 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DYNC1I2	Q13409	638 aa	Known RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DUPD1	Q68J44	220 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MMTAG2	Q9BU76	263 aa	Known RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PARP2	Q9UGN5	583 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	EXOC1L	A0A1B0GW35	172 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ZBED4	O75132	1171 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MYB	P10242	640 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CHRND	Q07001	517 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	KLRC3	Q07444	240 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DRAP1	Q14919	205 aa	Predicted RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	SLC5A9	Q2M3M2	681 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	FYB2	Q5VWT5	728 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MAPKAPK5	Q8IW41	473 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	OPTN	Q96CV9	577 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DNAJC1	Q96KC8	554 aa	Known RBP	11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CCDC87	Q9NVE4	849 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ANKIB1	Q9P2G1	1089 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	FBXO3	Q9UK99	471 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PCDHA12	Q9UN75	941 aa		11.37	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ARHGAP42	A6NI28	874 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	STK10	O94804	968 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CHKA	P35790	457 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MAGEA10	P43363	369 aa	Predicted RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	KRT17	Q04695	432 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MGAT5	Q09328	741 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MTMR2	Q13614	643 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CCDC62	Q6P9F0	684 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CROCCP2	Q86T23	111 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CYP4X1	Q8N118	509 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	LRRC57	Q8N9N7	239 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PNMA5	Q96PV4	448 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	C12orf65	Q9H3J6	166 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	KCNQ5	Q9NR82	932 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DDX18	Q9NVP1	670 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ANAPC5	Q9UJX4	755 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	DNAJC12	Q9UKB3	198 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	UST	Q9Y2C2	406 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	C4A	P0C0L4	1744 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	C4B	P0C0L5	1744 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	TBCA	O75347	108 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ESRRA	P11474	423 aa	Predicted RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	EEF2	P13639	858 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PRDX5	P30044	214 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PIK3CA	P42336	1068 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PLCB3	Q01970	1234 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	P3H1	Q32P28	736 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CERKL	Q49MI3	558 aa	Predicted RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ZDHHC24	Q6UX98	284 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RBM46	Q8TBY0	533 aa	Known RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	RFFL	Q8WZ73	363 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ELMO3	Q96BJ8	720 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	EDEM3	Q9BZQ6	932 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	MAGEF1	Q9HAY2	307 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	WASF2	Q9Y6W5	498 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PITPNM2	Q9BZ72	1349 aa		11.36	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PVALEF	A0A1B0GWK0	134 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	POTEF	A5A3E0	1075 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	FAM187A	A6NFU0	413 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	GOLGA8S	H3BPF8	625 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	GOLGA8M	H3BSY2	632 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	IFNB1	P01574	187 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CSF1R	P07333	972 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PLA2G4B	P0C869	781 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	POTEI	P0CG38	1075 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ATF2	P15336	505 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	FOXN2	P32314	431 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	POTEG	Q6S5H5	508 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	POTEE	Q6S8J3	1075 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	TBC1D16	Q8TBP0	767 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CKAP2	Q8WWK9	683 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CLIC5	Q9NZA1	410 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	ZBTB1	Q9Y2K1	713 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	LRCH1	Q9Y2L9	728 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	FLT1	P17948	1338 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	CYTH3	O43739	400 aa		11.35	□□□□□ -0.59
TRAPPC12-223	ENST00000497597	PHF2	O75151	1096 aa		11.35	□□□□□ -0.59

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