RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KCNH1O95259 989 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 VSIG8P0DPA2 414 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 DRD2P14416 443 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 MYOGP15173 224 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 RGS3P49796 1198 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 TLE2Q04725 743 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 SLFN5Q08AF3 891 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 MTX1Q13505 466 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 SNW1Q13573 536 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 FAM110CQ1W6H9 321 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 ALDH1L2Q3SY69 923 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 ANO1Q5XXA6 986 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 CDCA2Q69YH5 1023 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 CHPFQ8IZ52 775 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 TRMT2AQ8IZ69 625 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 MYO1HQ8N1T3 1032 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 CBARPQ8N350 705 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 CNTD1Q8N815 330 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 KCT2Q8NC54 265 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 C2CD4AQ8NCU7 369 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 KREMEN2Q8NCW0 462 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 SMG8Q8ND04 991 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 SMCR8Q8TEV9 937 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 UIMC1Q96RL1 719 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 RPS6KC1Q96S38 1066 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 PUS7LQ9H0K6 701 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 SIL1Q9H173 461 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 DNAJC18Q9H819 358 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 SMC4Q9NTJ3 1288 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 FAM105AQ9NUU6 356 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 AP4E1Q9UPM8 1137 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 CEP131Q9UPN4 1083 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 AGTPBP1Q9UPW5 1226 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 PA2G4Q9UQ80 394 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 LRRFIP2Q9Y608 721 aaKnown RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 FHOD1Q9Y613 1164 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 KMT2BQ9UMN6 2715 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 MYH1P12882 1939 aa5.15□□□□□ -1.59
VPS52-222ENST00000495981 GREB1LQ9C091 1923 aaPredicted RBP5.15□□□□□ -1.59
VPS52-222ENST00000495981 UNC79Q9P2D8 2635 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 SPTBN2O15020 2390 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 TRIM75PA6NK02 468 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 M0R2C6 588 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 ARNTLO00327 626 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 ERC2O15083 957 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 FRAT2O75474 233 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 LRIG2O94898 1065 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 CRTAMO95727 393 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 UBTFL1P0CB47 393 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 ITGA4P13612 1032 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 CPEP16870 476 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 IL15P40933 162 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 BTDP43251 543 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 TMPRSS15P98073 1019 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 SRSF11Q05519 484 aaKnown RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 SOX4Q06945 474 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 RRP1BQ14684 758 aaKnown RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 SNX17Q15036 470 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 DUOXA2Q1HG44 320 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 SHROOM1Q2M3G4 852 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 NXNQ6DKJ4 435 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 ZCCHC8Q6NZY4 707 aaKnown RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 FBXO11Q86XK2 927 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 FAM9BQ8IZU0 186 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 PRSS33Q8NF86 280 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 SYTL5Q8TDW5 730 aaPredicted RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 EDARADDQ8WWZ3 215 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 KCTD13Q8WZ19 329 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 FERMT2Q96AC1 680 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 CHMP4CQ96CF2 233 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 CCDC136Q96JN2 1154 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 MCMBPQ9BTE3 642 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 RHOBTB2Q9BYZ6 727 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 PORCNQ9H237 461 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 ALG13Q9NP73 1137 aaKnown RBP5.14□□□□□ -1.59
VPS52-222ENST00000495981 ACTL7BQ9Y614 415 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 TRANK1O15050 2925 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 ZNF318Q5VUA4 2279 aa5.14□□□□□ -1.59
VPS52-222ENST00000495981 MYH8P13535 1937 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 GPR75-ASB3A0A0A6YYF3 556 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 A0A1B0GUL7 405 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 ZNF891A8MT65 544 aaPredicted RBP5.13□□□□□ -1.59
VPS52-222ENST00000495981 PRKD3O94806 890 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 ARHGEF15O94989 841 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 SLITRK5O94991 958 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 HOXC12P31275 282 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 GMPRP36959 345 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 ADCYAP1R1P41586 468 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 RABGGTBP53611 331 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 JAG1P78504 1218 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 DSG1Q02413 1049 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 MECOMQ03112 1051 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 GRB10Q13322 594 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 INAVAQ3KP66 663 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 TMEM240Q5SV17 173 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 FAM102BQ5T8I3 360 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 SYDE2Q5VT97 1194 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 POMZP3Q6PJE2 187 aa5.13□□□□□ -1.59
VPS52-222ENST00000495981 KCNT2Q6UVM3 1135 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms