RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 URGCPQ8TCY9 931 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 ASAP3Q8TDY4 903 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 TBC1D13Q9NVG8 400 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 LRWD1Q9UFC0 647 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 LINC01565O15544 149 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 MBTPS2O43462 519 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 TSPAN1O60635 241 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 USO1O60763 962 aaKnown RBP26.88■■□□□ 1.89
HLA-C-209ENST00000495835 CSPG5O95196 566 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 MBTD1Q05BQ5 628 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 COASYQ13057 564 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 PTGDRQ13258 359 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 DUSP6Q16828 381 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 RILPL1Q5EBL4 403 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 RBM23Q86U06 439 aaKnown RBP26.88■■□□□ 1.89
HLA-C-209ENST00000495835 GJD3Q8N144 294 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 TMEM169Q96HH4 297 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 TCF25Q9BQ70 676 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 C1QTNF1Q9BXJ1 281 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 CSRNP2Q9H175 543 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 POLR3FQ9H1D9 316 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-209ENST00000495835 RSAD1Q9HA92 442 aa26.88■■□□□ 1.89
HLA-C-209ENST00000495835 RNASELQ05823 741 aaKnown RBP26.87■■□□□ 1.89
HLA-C-209ENST00000495835 AMHR2Q16671 573 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 TMEM184AQ6ZMB5 413 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 TMC7Q7Z402 723 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 PRIMPOLQ96LW4 560 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 NRDE2Q9H7Z3 1164 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 ENTPD7Q9NQZ7 604 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 CLEC1BQ9P126 229 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.87■■□□□ 1.89
HLA-C-209ENST00000495835 PCDHB6Q9Y5E3 794 aa26.87■■□□□ 1.89
HLA-C-209ENST00000495835 ARHGEF35A5YM69 484 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 SRGAP2BP0DMP2 458 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 CYP11B2P19099 503 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 GJB2P29033 226 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 CCT6AP40227 531 aaKnown RBP26.86■■□□□ 1.89
HLA-C-209ENST00000495835 PBX3P40426 434 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 POTEGQ6S5H5 508 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 PADI6Q6TGC4 694 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 ADHFE1Q8IWW8 467 aa26.86■■□□□ 1.89
HLA-C-209ENST00000495835 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.86■■□□□ 1.89
HLA-C-209ENST00000495835 A0A087WWV3 80 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 MEIS3P2A8K0S8 358 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 INPPL1O15357 1258 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 ZC3H11AO75152 810 aaKnown RBP eCLIP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 CD2BP2O95400 341 aaKnown RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 GALTP07902 379 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 ITGA4P13612 1032 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 NBR1Q14596 966 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 SMC1AQ14683 1233 aaKnown RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 PPP4R3CPQ6ZMV5 832 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 HACE1Q8IYU2 909 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 MRPL43Q8N983 215 aaKnown RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 SMRP1Q8NCR6 262 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 SMG8Q8ND04 991 aaKnown RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 POP1Q99575 1024 aaKnown RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 TMEM175Q9BSA9 504 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 C2orf40Q9H1Z8 148 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 PRMT7Q9NVM4 692 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-209ENST00000495835 PCDHGC5Q9Y5F6 944 aa26.85■■□□□ 1.89
HLA-C-209ENST00000495835 C5orf42Q9H799 3197 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 A0A1B0GUA9 196 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 C19orf67A6NJJ6 358 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 H3BQV1 296 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 GLP2RO95838 553 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 ARF4P18085 180 aaPredicted RBP26.84■■□□□ 1.89
HLA-C-209ENST00000495835 KCNC3Q14003 757 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 GIT2Q14161 759 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 FAM187BQ17R55 369 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 LONRF3Q496Y0 759 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 PLPP4Q5VZY2 271 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 CDCA2Q69YH5 1023 aaPredicted RBP26.84■■□□□ 1.89
HLA-C-209ENST00000495835 MCTP1Q6DN14 999 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 DTHD1Q6ZMT9 781 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 DDX53Q86TM3 631 aaKnown RBP26.84■■□□□ 1.89
HLA-C-209ENST00000495835 ZBTB8OSQ8IWT0 167 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 KCTD17Q8N5Z5 321 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 IGSF21Q96ID5 467 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 CD320Q9NPF0 282 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 SMC3Q9UQE7 1217 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 INPP5FQ9Y2H2 1132 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 IPPQ9Y573 584 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 IRAK3Q9Y616 596 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 ZMYM2Q9UBW7 1377 aa26.84■■□□□ 1.89
HLA-C-209ENST00000495835 LRRIQ4A6NIV6 560 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 PER2O15055 1255 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 ALDH2P05091 517 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 ZP2Q05996 745 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 PPP2R5AQ15172 486 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 SLC27A1Q6PCB7 646 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 FAM193BQ96PV7 902 aaPredicted RBP26.83■■□□□ 1.89
HLA-C-209ENST00000495835 FZD8Q9H461 694 aa26.83■■□□□ 1.89
HLA-C-209ENST00000495835 NT5C1B-RDH14C9J2C7 533 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 PI4K2BG5E9Z4 385 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 SSTR3P32745 418 aaPredicted RBP26.82■■□□□ 1.88
HLA-C-209ENST00000495835 NAMPTP43490 491 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 KRT79Q5XKE5 535 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 KIFAP3Q92845 792 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 CPB2Q96IY4 423 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms