RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 PCOLCEQ15113 449 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 PITRM1Q5JRX3 1037 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 ZBTB41Q5SVQ8 909 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 CCDC62Q6P9F0 684 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 KLHDC10Q6PID8 442 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 USP30Q70CQ3 517 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 LARP4Q71RC2 724 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 TPH2Q8IWU9 490 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 CCDC146Q8IYE0 955 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 BCL6BQ8N143 479 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 GFM2Q969S9 779 aaKnown RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 EAF2Q96CJ1 260 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 NEIL1Q96FI4 390 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 KIAA1683Q9H0B3 1180 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 POLR3BQ9NW08 1133 aaPredicted RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 TMPRSS11EQ9UL52 423 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 PMS2P1A4D2B8 440 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 PRPF3O43395 683 aaKnown RBP7.6□□□□□ -1.19
CCDC39-207ENST00000495817 IL33O95760 270 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 CLEC2LP0C7M8 214 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 AKAP5P24588 427 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 SLC5A3P53794 718 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 NOLC1Q14978 699 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCDC39-207ENST00000495817 RNF151Q2KHN1 245 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 MINDY4Q4G0A6 757 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 QRSL1Q9H0R6 528 aaKnown RBP7.6□□□□□ -1.19
CCDC39-207ENST00000495817 SYNPO2Q9UMS6 1093 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 OAZ3Q9UMX2 235 aa7.6□□□□□ -1.19
CCDC39-207ENST00000495817 ZRANB2O95218 330 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC39-207ENST00000495817 APOL3O95236 402 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 PFKMP08237 780 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 STAT5BP51692 787 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 ADKP55263 362 aaKnown RBP7.59□□□□□ -1.19
CCDC39-207ENST00000495817 TCIRG1Q13488 830 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 MUM1Q2TAK8 710 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 AUTS2Q8WXX7 1259 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 MTG2Q9H4K7 406 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 SMPD4Q9NXE4 827 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 PUF60Q9UHX1 559 aaKnown RBP7.59□□□□□ -1.19
CCDC39-207ENST00000495817 DENND2AQ9ULE3 1009 aa7.59□□□□□ -1.19
CCDC39-207ENST00000495817 MYPNQ86TC9 1320 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 A0A0A6YYJ9 748 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 GPR42O15529 346 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 LPOP22079 712 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-207ENST00000495817 ANO4Q32M45 955 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 LIMS2Q7Z4I7 341 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 LYSMD2Q8IV50 215 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 DNERQ8NFT8 737 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 CLIP3Q96DZ5 547 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 DYDC2Q96IM9 177 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 CSRNP2Q9H175 543 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 KCTD10Q9H3F6 313 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 FAM184BQ9ULE4 1060 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 EDARQ9UNE0 448 aa7.58□□□□□ -1.2
CCDC39-207ENST00000495817 CTDP1Q9Y5B0 961 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-207ENST00000495817 PATE3B3GLJ2 98 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 OPHN1O60890 802 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 MAP4K4O95819 1239 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 KRT18P05783 430 aaKnown RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 CR2P20023 1033 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 MAGEA10P43363 369 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 HGFACQ04756 655 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 RRP12Q5JTH9 1297 aaKnown RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 UNQ6494/PRO21346Q6UXR6 183 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 EPM2AIP1Q7L775 607 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 DGKHQ86XP1 1220 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 SLC41A1Q8IVJ1 513 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 NKD2Q969F2 451 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 SLC7A6OSQ96CW6 309 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-207ENST00000495817 LOXL4Q96JB6 756 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 WDR92Q96MX6 357 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 LRRC37BQ96QE4 947 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 PRDM11Q9NQV5 511 aa7.57□□□□□ -1.2
CCDC39-207ENST00000495817 ERC2O15083 957 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 LPLP06858 475 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 OSMP13725 252 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 HSPA6P17066 643 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 C5AR1P21730 350 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 RPS19P39019 145 aaKnown RBP7.56□□□□□ -1.2
CCDC39-207ENST00000495817 GPR15P49685 360 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 LGALS4P56470 323 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 SPIDRQ14159 915 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 TBR1Q16650 682 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 MAN2A1Q16706 1144 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 CCDC178Q5BJE1 867 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 MBNL2Q5VZF2 373 aaKnown RBP7.56□□□□□ -1.2
CCDC39-207ENST00000495817 MIER2Q8N344 545 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 OR14C36Q8NHC7 312 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 CFHR4Q92496 578 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 HIST1H2AHQ96KK5 128 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 HIST1H2AJQ99878 128 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 PRDM12Q9H4Q4 367 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 IFT122Q9HBG6 1241 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 OBP2AQ9NY56 170 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 PRSS50Q9UI38 385 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 ZBTB21Q9ULJ3 1066 aa7.56□□□□□ -1.2
CCDC39-207ENST00000495817 VSTM5A8MXK1 200 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 SLC26A4O43511 780 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms