RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 LTA4HP09960 611 aaKnown RBP7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 DUSP2Q05923 314 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 CRHR2Q13324 411 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 R3HDM1Q15032 1099 aaKnown RBP7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 PDCD1Q15116 288 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 Q6ZSN1 163 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 ZNF808Q8N4W9 903 aaPredicted RBP7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 ING3Q9NXR8 418 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 TMPRSS11EQ9UL52 423 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 WASHC2AQ641Q2 1341 aa7.24□□□□□ -1.25
NCKAP1-208ENST00000495619 SBNO2Q9Y2G9 1366 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 PRAMEF4O60810 478 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 GYPEP15421 78 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 GNAT2P19087 354 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 ACRV1P26436 265 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 SCAND1P57086 179 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 ADAM8P78325 824 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 MRPS9P82933 396 aaKnown RBP7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 TRIM25Q14258 630 aaKnown RBP7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 CDSNQ15517 529 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 ELAVL1Q15717 326 aaKnown RBP7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 SPDYAQ5MJ70 313 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 PIK3C3Q8NEB9 887 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 AUTS2Q8WXX7 1259 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 EVLQ9UI08 416 aaPredicted RBP7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 SH3BP1Q9Y3L3 701 aa7.23□□□□□ -1.25
NCKAP1-208ENST00000495619 A0A1W2PR48 441 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 PHF2O75151 1096 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 CNGB1Q14028 1251 aaPredicted RBP7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 USP39Q53GS9 565 aaKnown RBP7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 C19orf54Q5BKX5 351 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 SPRED1Q7Z699 444 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 C1orf210Q8IVY1 113 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 ZNF512Q96ME7 567 aaPredicted RBP7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 FDXACB1Q9BRP7 624 aaPredicted RBP7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
NCKAP1-208ENST00000495619 CANXP27824 592 aaKnown RBP7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 UBE3CQ15386 1083 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 GGNQ86UU5 652 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 LYSMD2Q8IV50 215 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 LMBR1Q8WVP7 490 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 FATE1Q969F0 183 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 PUS7LQ9H0K6 701 aaKnown RBP7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 C14orf119Q9NWQ9 140 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 HECAQ9UBI9 543 aaPredicted RBP7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 DPP7Q9UHL4 492 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 EDARQ9UNE0 448 aa7.21□□□□□ -1.26
NCKAP1-208ENST00000495619 GOLGA6L6A8MZA4 724 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 GASTP01350 101 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 MAN2A2P49641 1150 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 SLC5A3P53794 718 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 RNF207Q6ZRF8 634 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 USP51Q70EK9 711 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 PDZD4Q76G19 769 aaPredicted RBP7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 APBB1IPQ7Z5R6 666 aaPredicted RBP7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 SLC41A1Q8IVJ1 513 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 AMOTL1Q8IY63 956 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 IL17RAQ96F46 866 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 CDC5LQ99459 802 aaKnown RBP7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 CSRNP2Q9H175 543 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 PARPBPQ9NWS1 579 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 SLC5A4Q9NY91 659 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 CLCA2Q9UQC9 943 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 ATP8A1Q9Y2Q0 1164 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 RPTORQ8N122 1335 aa7.2□□□□□ -1.26
NCKAP1-208ENST00000495619 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 PRKD3O94806 890 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 GZMKP49863 264 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 CDK17Q00537 523 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 ANO4Q32M45 955 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 NECAB2Q7Z6G3 386 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 FAM83AQ86UY5 434 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 DDX42Q86XP3 938 aaKnown RBP eCLIP7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 GLB1L3Q8NCI6 653 aaPredicted RBP7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 ZCRB1Q8TBF4 217 aaKnown RBP7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 TGFBRAP1Q8WUH2 860 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 SNX33Q8WV41 574 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 ST8SIA2Q92186 375 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 MENTQ9BUN1 341 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 ZNF341Q9BYN7 854 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 QRSL1Q9H0R6 528 aaKnown RBP7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 VPS11Q9H270 941 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 DNAJC28Q9NX36 388 aa7.19□□□□□ -1.26
NCKAP1-208ENST00000495619 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 MATN3O15232 486 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 HSP90B1P14625 803 aaKnown RBP7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 TNFRSF1AP19438 455 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 CASRP41180 1078 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 FOXE3Q13461 319 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 BTNL9Q6UXG8 535 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 ATXN2LQ8WWM7 1075 aaKnown RBP7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 EXTL1Q92935 676 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 ORAI2Q96SN7 254 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 CPPED1Q9BRF8 314 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 ACE2Q9BYF1 805 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
NCKAP1-208ENST00000495619 IFT122Q9HBG6 1241 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms