RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 TLR9Q9NR96 1032 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 SPG21Q9NZD8 308 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 PUF60Q9UHX1 559 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 MUC3AQ02505 3323 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 ATG2AQ2TAZ0 1938 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 PLXNA4Q9HCM2 1894 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 VWA3AA6NCI4 1184 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 E9PMD0 336 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 B4GALT5O43286 388 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 ARF4P18085 180 aaPredicted RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 PDCP20941 246 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 PPM1AP35813 382 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 ERVFC1P60507 584 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 KRT17Q04695 432 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 RNASELQ05823 741 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 BRAPQ7Z569 592 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 ADGRD2Q7Z7M1 963 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 RBM23Q86U06 439 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 SMG8Q8ND04 991 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 BSNDQ8WZ55 320 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 MRPS27Q92552 414 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 CCDC51Q96ER9 411 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 EIF2AQ9BY44 585 aaKnown RBP19.92■□□□□ 0.78
COL20A1-207ENST00000494913 CSRNP2Q9H175 543 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 TBC1D13Q9NVG8 400 aa19.92■□□□□ 0.78
COL20A1-207ENST00000494913 BDP1A6H8Y1 2624 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 NT5C1B-RDH14C9J2C7 533 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 ZC3H11AO75152 810 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL20A1-207ENST00000494913 NCLP19338 710 aaKnown RBP19.91■□□□□ 0.78
COL20A1-207ENST00000494913 BCAR1P56945 870 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 CTC1Q2NKJ3 1217 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 ARL6IP4Q66PJ3 421 aaKnown RBP19.91■□□□□ 0.78
COL20A1-207ENST00000494913 ZBTB8OSQ8IWT0 167 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 CNNM3Q8NE01 707 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 RSAD1Q9HA92 442 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 LZTS1Q9Y250 596 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 IPPQ9Y573 584 aa19.91■□□□□ 0.78
COL20A1-207ENST00000494913 TNFRSF10AO00220 468 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 EYA4O95677 639 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 ITGA4P13612 1032 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 LTBRP36941 435 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 NRIP1P48552 1158 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 CDCA2Q69YH5 1023 aaPredicted RBP19.9■□□□□ 0.78
COL20A1-207ENST00000494913 CDR2LQ86X02 465 aaPredicted RBP19.9■□□□□ 0.78
COL20A1-207ENST00000494913 SLC39A11Q8N1S5 342 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 URGCPQ8TCY9 931 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 GBP3Q9H0R5 595 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 NRDE2Q9H7Z3 1164 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 TLE6Q9H808 572 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 FOXD4L1Q9NU39 408 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 HES2Q9Y543 173 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 CNTNAP2Q9UHC6 1331 aa19.9■□□□□ 0.78
COL20A1-207ENST00000494913 LINC01565O15544 149 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 AFF1P51825 1210 aaKnown RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 DLX2Q07687 328 aaPredicted RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 ADAM15Q13444 863 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 PPP2R5AQ15172 486 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 PTCRAQ6ISU1 281 aaPredicted RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 PDE12Q6L8Q7 609 aaKnown RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 DEPTORQ8TB45 409 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 KIFAP3Q92845 792 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 INTS4Q96HW7 963 aaKnown RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 IFT74Q96LB3 600 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 TRIM6Q9C030 488 aaPredicted RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 C2orf40Q9H1Z8 148 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 FZD8Q9H461 694 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 UBN1Q9NPG3 1134 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 ENTPD7Q9NQZ7 604 aa19.89■□□□□ 0.77
COL20A1-207ENST00000494913 PRMT7Q9NVM4 692 aaPredicted RBP19.89■□□□□ 0.77
COL20A1-207ENST00000494913 A0A1B0GUA9 196 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 K7ELQ4 463 aaPredicted RBP19.88■□□□□ 0.77
COL20A1-207ENST00000494913 FSCN2O14926 492 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 PER2O15055 1255 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 LIG1P18858 919 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 SYT1P21579 422 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 NAMPTP43490 491 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 PLPP4Q5VZY2 271 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 SLC27A1Q6PCB7 646 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 ZNF280BQ86YH2 543 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 PRIMPOLQ96LW4 560 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 PLIN2Q99541 437 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 TCF25Q9BQ70 676 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 APOL6Q9BWW8 343 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 KANSL3Q9P2N6 904 aa19.88■□□□□ 0.77
COL20A1-207ENST00000494913 NPTXRO95502 500 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 POMCP01189 267 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 GALTP07902 379 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 CLUL1Q15846 466 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 MAPK6Q16659 721 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 FAM187BQ17R55 369 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 PUS10Q3MIT2 529 aaKnown RBP19.87■□□□□ 0.77
COL20A1-207ENST00000494913 TMC7Q7Z402 723 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 EFHBQ8N7U6 833 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 TMEM169Q96HH4 297 aa19.87■□□□□ 0.77
COL20A1-207ENST00000494913 PNMA5Q96PV4 448 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms