RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
ATG4B-224ENST00000494132 CDK5RAP3Q96JB5 506 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 ASB2Q96Q27 587 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 LMAN2LQ9H0V9 348 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 IGFLR1Q9H665 355 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 UBE2ZQ9H832 354 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-224ENST00000494132 AAASQ9NRG9 546 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 IPPQ9Y573 584 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 STK24Q9Y6E0 443 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 VCANP13611 3396 aa16.27■□□□□ 0.19
ATG4B-224ENST00000494132 ZNF623O75123 536 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 ZC3H11AO75152 810 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATG4B-224ENST00000494132 OFD1O75665 1012 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 NPTXRO95502 500 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 SKIP12755 728 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 MARCKSP29966 332 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-224ENST00000494132 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 TJAP1Q5JTD0 557 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 CDCA2Q69YH5 1023 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-224ENST00000494132 NOTUMQ6P988 496 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 GLB1LQ6UWU2 654 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 ZBTB8OSQ8IWT0 167 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 DEPTORQ8TB45 409 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 LRRC15Q8TF66 581 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 ZNF558Q96NG5 402 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 NFKBIZQ9BYH8 718 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
ATG4B-224ENST00000494132 RSAD1Q9HA92 442 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
ATG4B-224ENST00000494132 CITO14578 2027 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 SFI1A8K8P3 1242 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 B4GALT3O60512 393 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 HIP1RO75146 1068 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 HSP90AA1P07900 732 aaKnown RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 KCNA5P22460 613 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 NAMPTP43490 491 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 ERVFC1P60507 584 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 DHX8Q14562 1220 aaKnown RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 PTPAQ15257 358 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 TMEM132AQ24JP5 1023 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 NAALADL2Q58DX5 795 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 RBM23Q86U06 439 aaKnown RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 TMEM173Q86WV6 379 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 DAW1Q8N136 415 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 MICAL1Q8TDZ2 1067 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 MRPL9Q9BYD2 267 aaKnown RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-224ENST00000494132 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 DNAJB4Q9UDY4 337 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 COG5Q9UP83 839 aa16.25■□□□□ 0.19
ATG4B-224ENST00000494132 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 LINC01565O15544 149 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 POMCP01189 267 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 PRKCBP05771 671 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 ITGA4P13612 1032 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 NCLP19338 710 aaKnown RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 AXLP30530 894 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 MLH1P40692 756 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 PEX3P56589 373 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 BCAR1P56945 870 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 RNASELQ05823 741 aaKnown RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 HYAL1Q12794 435 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 HYIQ5T013 277 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 C1orf186Q6ZWK4 172 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 USP49Q70CQ1 688 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 MRPL10Q7Z7H8 261 aaKnown RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 ZNF280BQ86YH2 543 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 RASSF8Q8NHQ8 419 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 KIFAP3Q92845 792 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 IFT74Q96LB3 600 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 GAD1Q99259 594 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 FZD8Q9H461 694 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 NRDE2Q9H7Z3 1164 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
ATG4B-224ENST00000494132 PRMT7Q9NVM4 692 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-224ENST00000494132 CCDC169A6NNP5 214 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 BMP15O95972 392 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 PLA2G4BP0C869 781 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 AKAP5P24588 427 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 UBA7P41226 1012 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 MAPK7Q13164 816 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 PRPF4BQ13523 1007 aaKnown RBP16.23■□□□□ 0.19
ATG4B-224ENST00000494132 PPP2R5AQ15172 486 aa16.23■□□□□ 0.19
ATG4B-224ENST00000494132 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■□□□ 11.9
ATG4B-224ENST00000494132 MAPK6Q16659 721 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms