RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TNFAIP2Q03169 654 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 MAP7Q14244 749 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 KAZNQ674X7 775 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
BRCA1-222ENST00000493919 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
BRCA1-222ENST00000493919 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 PCDHA4Q9UN74 947 aa12.58□□□□□ -0.4
BRCA1-222ENST00000493919 NOSIPQ9Y314 301 aaKnown RBP12.58□□□□□ -0.4
BRCA1-222ENST00000493919 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 SPTLC2O15270 562 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 B3GALNT1O75752 331 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 PGK1P00558 417 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-222ENST00000493919 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
BRCA1-222ENST00000493919 ELF2Q15723 593 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 LHX8Q68G74 356 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 TAPT1Q6NXT6 567 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 MIS18BP1Q6P0N0 1132 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 NCCRP1Q6ZVX7 275 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-222ENST00000493919 DAAM2Q86T65 1068 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-222ENST00000493919 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 WDR11Q9BZH6 1224 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 BHMT2Q9H2M3 363 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 RTEL1Q9NZ71 1219 aa12.57□□□□□ -0.4
BRCA1-222ENST00000493919 MBD3O95983 291 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 SLC8A1P32418 973 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 PCNX4Q63HM2 1172 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 TLK2Q86UE8 772 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 PHF20Q9BVI0 1012 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 OXCT2Q9BYC2 517 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 ABLIM1O14639 778 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 SORBS3O60504 671 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 ARIH2O95376 493 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 C6orf222P0C671 652 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 TXNP10599 105 aaKnown RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 SMPD1P17405 629 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 ENDOUP21128 410 aaKnown RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 OXCT1P55809 520 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 MRPS9P82933 396 aaKnown RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 TMEM62Q0P6H9 643 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 TTLL4Q14679 1199 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-222ENST00000493919 GSDMBQ8TAX9 411 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 ANKRD49Q8WVL7 239 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
BRCA1-222ENST00000493919 K7ELQ4 463 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 LSM1O15116 133 aaKnown RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 DIAPH2O60879 1101 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 DUSP11O75319 330 aaKnown RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 FARP2O94887 1054 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 GBP2P32456 591 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 WDR75Q8IWA0 830 aaKnown RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 ESX1Q8N693 406 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 FAM200AQ8TCP9 573 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 TRPC4APQ8TEL6 797 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 DIS3LQ8TF46 1054 aaKnown RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 COPS5Q92905 334 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 UROC1Q96N76 676 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 SPC25Q9HBM1 224 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 TMCO1Q9UM00 188 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
BRCA1-222ENST00000493919 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
BRCA1-222ENST00000493919 KBTBD13C9JR72 458 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 NEMFO60524 1076 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 RGS20O76081 388 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 FSBPO95073 299 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 ABL1P00519 1130 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 GJB2P29033 226 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 KRT2P35908 639 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 ZNF76P36508 570 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 SREBF1P36956 1147 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 FNTAP49354 379 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 NAA30Q147X3 362 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-222ENST00000493919 NPY5RQ15761 445 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 LY6KQ17RY6 165 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 DUSP28Q4G0W2 176 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 FBXW10Q5XX13 1052 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 KRT40Q6A162 431 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 IQSEC1Q6DN90 963 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 C11orf74Q86VG3 221 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 OXER1Q8TDS5 423 aa12.54□□□□□ -0.4
BRCA1-222ENST00000493919 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms