RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 INTS7Q9NVH2 962 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TUBA8Q9NY65 449 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 FAM8A1Q9UBU6 413 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 RASAL2Q9UJF2 1139 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CLEC4AQ9UMR7 237 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 WDR37Q9Y2I8 494 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TTC21BQ7Z4L5 1316 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 WDR19Q8NEZ3 1342 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 STMND1H3BQB6 276 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 H7C1W4 665 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 EBAG9O00559 213 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 ABLIM1O14639 778 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TLR3O15455 904 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 MAGEB3O15480 346 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TTI1O43156 1089 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 PRPSAP2O60256 369 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 GREM1O60565 184 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 KERAO60938 352 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 SGPL1O95470 568 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 APBA3O96018 575 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 ASGR1P07306 291 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 PSAPP07602 524 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 POLR2MP0CAP2 368 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 DLATP10515 647 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CSF2RAP15509 400 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 JUNDP17535 347 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CDH3P22223 829 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 JAK1P23458 1154 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TARSP26639 723 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 PRKAR2BP31323 418 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 MC4RP32245 332 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 RFC4P35249 363 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 IRS1P35568 1242 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 HNF1BP35680 557 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 SLC16A2P36021 539 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CPA2P48052 419 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 AFF3P51826 1226 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 BLVRAP53004 296 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 GALNT1Q10472 559 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TFCP2Q12800 502 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 IKBKEQ14164 716 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 MAPKAPK3Q16644 382 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CCDC57Q2TAC2 916 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 ANO4Q32M45 955 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 DGKKQ5KSL6 1271 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 DIEXFQ68CQ4 756 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 NAA16Q6N069 864 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 LRSAM1Q6UWE0 723 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 LEKR1Q6ZMV7 388 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 RAB11FIP2Q7L804 512 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CAND1Q86VP6 1230 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 OSTM1Q86WC4 334 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 SIMC1Q8NDZ2 872 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 DENND6BQ8NEG7 585 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 ARMC2Q8NEN0 867 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 SEPT1Q8WYJ6 367 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 KRT35Q92764 455 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 KISS1RQ969F8 398 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TUBGCP3Q96CW5 907 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 RRP36Q96EU6 259 aaKnown RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 EXOC2Q96KP1 924 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 HS6ST2Q96MM7 605 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TMEM74Q96NL1 305 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 PSKH2Q96QS6 385 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TTC12Q9H892 705 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 NMRK2Q9NPI5 230 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 SEMA3GQ9NS98 782 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-220ENST00000492859 HAUS2Q9NVX0 235 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TOR4AQ9NXH8 423 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 RTEL1Q9NZ71 1219 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 HDAC6Q9UBN7 1215 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 GRHPRQ9UBQ7 328 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 FETUBQ9UGM5 382 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TEKT2Q9UIF3 430 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 VPS28Q9UK41 221 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 CROTQ9UKG9 612 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 TTC41PQ6P2S7 1318 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 KANK1Q14678 1352 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 NINLQ9Y2I6 1382 aa4.58□□□□□ -1.68
BRCA1-220ENST00000492859 L7N2F9 121 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 DDX39AO00148 427 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 NPC1O15118 1278 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 POLR2DO15514 142 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 FOXO3O43524 673 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 AP1G1O43747 822 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 RANBP6O60518 1105 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 SEC22BO75396 215 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ZNF189O75820 626 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 DNAJC8O75937 253 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 HSPA8P11142 646 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 SCG2P13521 617 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 ALOX12P18054 663 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 MAGEA10P43363 369 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 PRIM2P49643 509 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 DIO1P49895 249 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 MRPS5P82675 430 aaKnown RBP4.57□□□□□ -1.68
BRCA1-220ENST00000492859 CYP4F8P98187 520 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 TFAP4Q01664 338 aa4.57□□□□□ -1.68
BRCA1-220ENST00000492859 MAP3K10Q02779 954 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms