RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PHLDB3Q6NSJ2 640 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 DSTYKQ6XUX3 929 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 PASD1Q8IV76 773 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 ZBED8Q8IZ13 594 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 SYCE1Q8N0S2 351 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 FANCBQ8NB91 859 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 FNDC8Q8TC99 324 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 FBXO25Q8TCJ0 367 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 DQX1Q8TE96 717 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 ECSITQ9BQ95 431 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 MTRF1LQ9UGC7 380 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 RASAL2Q9UJF2 1139 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 NENFQ9UMX5 172 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 R3HDM2Q9Y2K5 976 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 CCDC162PA2VCL2 907 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 TMEM110-MUSTN1A8MSY1 372 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 ANXA13P27216 316 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 STX2P32856 288 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 NEK3P51956 506 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 RAB15P59190 212 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 FOXO4P98177 505 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 PDCD4Q53EL6 469 aaKnown RBP10.39□□□□□ -0.75
VPS8-225ENST00000492449 TMEM53Q6P2H8 277 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 MIGA2Q7L4E1 593 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 TMEM110Q86TL2 294 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 TXNDC2Q86VQ3 553 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 NUP93Q8N1F7 819 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 PIP4K2CQ8TBX8 421 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 ZNF398Q8TD17 642 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 MGARPQ8TDB4 240 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 CCSER1Q9C0I3 900 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 TMEM60Q9H2L4 133 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 SSX2IPQ9Y2D8 614 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 hCG_2014768A0A024R1R8 64 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 F8W8V4 182 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 CCDC22O60826 627 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 ZWINTO95229 277 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 NAT1P18440 290 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 GTF2H1P32780 548 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 MPP2Q14168 576 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 FAM83BQ5T0W9 1011 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 SOGA3Q5TF21 947 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 DAAM2Q86T65 1068 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 MYOCDQ8IZQ8 938 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 SDR16C5Q8N3Y7 309 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 DEPTORQ8TB45 409 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 C10orf82Q8WW14 230 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 BTBD10Q9BSF8 475 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 CCDC113Q9H0I3 377 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 CROTQ9UKG9 612 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 KIF1AQ12756 1690 aa10.39□□□□□ -0.75
VPS8-225ENST00000492449 ADD2P35612 726 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 GRIA2P42262 883 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PLTPP55058 493 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 FKBP4Q02790 459 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS8-225ENST00000492449 FUT2Q10981 343 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 AIMP1Q12904 312 aaKnown RBP10.38□□□□□ -0.75
VPS8-225ENST00000492449 MAPK7Q13164 816 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS8-225ENST00000492449 JAMLQ86YT9 394 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 SNX27Q96L92 541 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 SIKE1Q9BRV8 207 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.38□□□□□ -0.757e-7■■■□□ 14.8
VPS8-225ENST00000492449 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 LGALS13Q9UHV8 139 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PCDHA3Q9Y5H8 950 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 RGPD2P0DJD1 1756 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 DOCK2Q92608 1830 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PFASO15067 1338 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 E9PBE3 544 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 EYA2O00167 538 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 VILLO15195 856 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 RNASEH1O60930 286 aaKnown RBP10.38□□□□□ -0.75
VPS8-225ENST00000492449 MUTP22033 750 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 FOXN2P32314 431 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PTGIRP43119 386 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 WTAPQ15007 396 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
VPS8-225ENST00000492449 Q6ZNX1 250 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 TMTC3Q6ZXV5 915 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PEX26Q7Z412 305 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 BBS5Q8N3I7 341 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 STMN2Q93045 179 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 ABTB1Q969K4 478 aaPredicted RBP10.38□□□□□ -0.75
VPS8-225ENST00000492449 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 ANKRD36CQ5JPF3 1778 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 PODXLO00592 558 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 GSC2O15499 205 aa10.38□□□□□ -0.75
VPS8-225ENST00000492449 RNMTO43148 476 aaKnown RBP10.38□□□□□ -0.75
VPS8-225ENST00000492449 CBX6O95503 412 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms