RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NEK11Q8NG66 645 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 TTYH3Q9C0H2 523 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 PDE11AQ9HCR9 933 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 ZNHIT6Q9NWK9 470 aaKnown RBP24.87■■□□□ 1.57
USF3-203ENST00000491165 KAT6AQ92794 2004 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 EVPLQ92817 2033 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 TRIP12Q14669 1992 aaPredicted RBP24.87■■□□□ 1.57
USF3-203ENST00000491165 CCL5P13501 91 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 CYLC1P35663 651 aaPredicted RBP24.86■■□□□ 1.57
USF3-203ENST00000491165 SLC26A2P50443 739 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 GIT2Q14161 759 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 KCNA10Q16322 511 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 OTUD6AQ7L8S5 288 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 TRPC6Q9Y210 931 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 ASGR1P07306 291 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 ASIC1P78348 528 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 LRRC41Q15345 812 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 KIAA0753Q2KHM9 967 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 KIAA1328Q86T90 577 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 HPS3Q969F9 1004 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 EXOC4Q96A65 974 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 ZNF333Q96JL9 665 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 CNOT6LQ96LI5 555 aaKnown RBP24.86■■□□□ 1.57
USF3-203ENST00000491165 RNF208Q9H0X6 261 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 XPNPEP1Q9NQW7 623 aa24.86■■□□□ 1.57
USF3-203ENST00000491165 INSRRP14616 1297 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 AMPD3Q01432 767 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 TBC1D8BQ0IIM8 1120 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 HIC1Q14526 733 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 DAW1Q8N136 415 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 DEFB118Q96PH6 123 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 SPC25Q9HBM1 224 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 GPRC5CQ9NQ84 441 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 ADAM21Q9UKJ8 722 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 SFI1A8K8P3 1242 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 HAS3O00219 553 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 KRT86O43790 486 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 MSCO60682 206 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 CST5P28325 142 aaPredicted RBP24.85■■□□□ 1.57
USF3-203ENST00000491165 BRDTQ58F21 947 aaPredicted RBP24.85■■□□□ 1.57
USF3-203ENST00000491165 ANKRD40Q6AI12 368 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 WDR93Q6P2C0 686 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 PDLIM7Q9NR12 457 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 NRBP2Q9NSY0 501 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 AGPAT5Q9NUQ2 364 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 PSD3Q9NYI0 1048 aa24.85■■□□□ 1.57
USF3-203ENST00000491165 IPO7O95373 1038 aaKnown RBP24.84■■□□□ 1.57
USF3-203ENST00000491165 HNRNPH2P55795 449 aaKnown RBP24.84■■□□□ 1.57
USF3-203ENST00000491165 ZBED6P86452 979 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 MAPK7Q13164 816 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 CNNM4Q6P4Q7 775 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 CCDC170Q8IYT3 715 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 JAKMIP2Q96AA8 810 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 FAM167AQ96KS9 214 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 CCDC43Q96MW1 224 aaKnown RBP24.84■■□□□ 1.57
USF3-203ENST00000491165 SAR1BQ9Y6B6 198 aa24.84■■□□□ 1.57
USF3-203ENST00000491165 ENC1O14682 589 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 MTIF2P46199 727 aaKnown RBP24.83■■□□□ 1.57
USF3-203ENST00000491165 IGBP1P78318 339 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 STK4Q13043 487 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 MFSD10Q14728 455 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 DHX33Q9H6R0 707 aaKnown RBP24.83■■□□□ 1.57
USF3-203ENST00000491165 SUGCTQ9HAC7 445 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 HBP1O60381 514 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 ATP1A1P05023 1023 aaKnown RBP24.83■■□□□ 1.57
USF3-203ENST00000491165 IDEP14735 1019 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 GYS2P54840 703 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 DRP2Q13474 957 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 CASP8Q14790 479 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 PAPD7Q5XG87 772 aaKnown RBP24.83■■□□□ 1.57
USF3-203ENST00000491165 NHEJ1Q9H9Q4 299 aaPredicted RBP24.83■■□□□ 1.57
USF3-203ENST00000491165 HDAC6Q9UBN7 1215 aa24.83■■□□□ 1.57
USF3-203ENST00000491165 EIF3CLB5ME19 914 aaKnown RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 PSEN2P49810 448 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 PKN2Q16513 984 aaKnown RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 PCMTD1Q96MG8 357 aaPredicted RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 EIF3CQ99613 913 aaKnown RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 NOC4LQ9BVI4 516 aaKnown RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 FGFBP2Q9BYJ0 223 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 FRMD3A2A2Y4 597 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 HIP1RO75146 1068 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 KRT18P05783 430 aaKnown RBP24.82■■□□□ 1.56
USF3-203ENST00000491165 GUCY2CP25092 1073 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 KLK7P49862 253 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 EHHADHQ08426 723 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 COBLL1Q53SF7 1204 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 MARCH8Q5T0T0 291 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 ARMC5Q96C12 935 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 EEF2KMTQ96G04 330 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 TFR2Q9UP52 801 aa24.82■■□□□ 1.56
USF3-203ENST00000491165 KIAA0100Q14667 2235 aaKnown RBP24.81■■□□□ 1.56
USF3-203ENST00000491165 RBAK-RBAKDNI3L0D1 243 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 DGAT1O75907 488 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 FIGNQ5HY92 759 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 MIIPQ5JXC2 388 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 RNF180Q86T96 592 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 GLIS3Q8NEA6 775 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 RPGRIP1Q96KN7 1286 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 SETD4Q9NVD3 440 aa24.81■■□□□ 1.56
USF3-203ENST00000491165 KCND2Q9NZV8 630 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms