RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 GGPS1O95749 300 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 TNNT1P13805 278 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 FECHP22830 423 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 CASP5P51878 434 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 NCKAP1LP55160 1127 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 KRT83P78385 493 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 CDK17Q00537 523 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 SP4Q02446 784 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 MAPK7Q13164 816 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 UGCGQ16739 394 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 ANO5Q75V66 913 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 FAM186BQ8IYM0 893 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 KIF18AQ8NI77 898 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 DNAJC7Q99615 494 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 ARID2Q68CP9 1835 aa11.21□□□□□ -0.62
HDAC3-210ENST00000490808 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 TTC26A0AVF1 554 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 EXOC3O60645 756 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 PPP1R37O75864 691 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 ACLYP53396 1101 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 NPEPPSP55786 919 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 PEX3P56589 373 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 STRN3Q13033 797 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 SNX17Q15036 470 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 MTERF2Q49AM1 385 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 GBP6Q6ZN66 633 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 GLG1Q92896 1179 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 TOX2Q96NM4 488 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 FGFBP2Q9BYJ0 223 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 KIAA1586Q9HCI6 787 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 AGPAT3Q9NRZ7 376 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 TRMT1Q9NXH9 659 aaKnown RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 CEP72Q9P209 647 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 DOCK5Q9H7D0 1870 aa11.2□□□□□ -0.62
HDAC3-210ENST00000490808 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
HDAC3-210ENST00000490808 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 CLIC2O15247 247 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 TGFB1I1O43294 461 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 ADCY6O43306 1168 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 ARIH2O95376 493 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 PGK1P00558 417 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 MMP3P08254 477 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 TCF7P36402 384 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 SP2Q02086 613 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 ENPEPQ07075 957 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 KCNA10Q16322 511 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 ZC2HC1CQ53FD0 456 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 E4F1Q66K89 784 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 PLA2G4FQ68DD2 849 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 SLFN12LQ6IEE8 588 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 DAW1Q8N136 415 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 XXYLT1Q8NBI6 393 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 SYN2Q92777 582 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 PAWRQ96IZ0 340 aaKnown RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 SPATA33Q96N06 139 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 COL25A1Q9BXS0 654 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 STARD7Q9NQZ5 370 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 DMAC2Q9NW81 257 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-210ENST00000490808 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
HDAC3-210ENST00000490808 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-210ENST00000490808 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 SLC16A4O15374 487 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 P4HA2O15460 535 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 ZNF862O60290 1169 aa11.18□□□□□ -0.62
HDAC3-210ENST00000490808 HBP1O60381 514 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms