RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	CDY2A	Q9Y6F7	541 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	SBNO2	Q9Y2G9	1366 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	GPR39	O43194	453 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	MTSS1	O43312	755 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	PRAMEF4	O60810	478 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	DNAJC6	O75061	913 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	STC2	O76061	302 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	AMH	P03971	560 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	TNFRSF1A	P19438	455 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	ENPP1	P22413	925 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	CASR	P41180	1078 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	CDK17	Q00537	523 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	SPIDR	Q14159	915 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	TAS1R1	Q7RTX1	841 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	C1orf210	Q8IVY1	113 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	OR5M3	Q8NGP4	307 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	COG1	Q8WTW3	980 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	QRSL1	Q9H0R6	528 aa	Known RBP	5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	EPC1	Q9H2F5	836 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	C14orf119	Q9NWQ9	140 aa		5.83	□□□□□ -1.48
PHC3-212	ENST00000490723	HECA	Q9UBI9	543 aa	Predicted RBP	5.83	□□□□□ -1.48
PHC3-212	ENST00000490723		A0A1W2PR48	441 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	PRKD3	O94806	890 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	POU3F3	P20264	500 aa	Predicted RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	CCT2	P78371	535 aa	Known RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	CRHR2	Q13324	411 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	UBE3C	Q15386	1083 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	FAM214A	Q32MH5	1076 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	RNF187	Q5TA31	235 aa	Predicted RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	RNF207	Q6ZRF8	634 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	SPATS2	Q86XZ4	545 aa	Known RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	GSPT2	Q8IYD1	628 aa	Known RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	ANKRD35	Q8N283	1001 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	MB21D1	Q8N884	522 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	LMBR1	Q8WVP7	490 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	AHCYL2	Q96HN2	611 aa	Known RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	ZNF512	Q96ME7	567 aa	Predicted RBP	5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	VPS11	Q9H270	941 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	GIT1	Q9Y2X7	761 aa		5.82	□□□□□ -1.48
PHC3-212	ENST00000490723	CADPS	Q9ULU8	1353 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	NRP1	O14786	923 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	PLSCR1	O15162	318 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	CYP27B1	O15528	508 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	CFB	P00751	764 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	LTA4H	P09960	611 aa	Known RBP	5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	ACRV1	P26436	265 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	CANX	P27824	592 aa	Known RBP	5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	DUSP2	Q05923	314 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	RNF219	Q5W0B1	726 aa	Predicted RBP	5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	ABHD15	Q6UXT9	468 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	MIEF2	Q96C03	454 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	RAX2	Q96IS3	184 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	TMX1	Q9H3N1	280 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	MCM8	Q9UJA3	840 aa		5.81	□□□□□ -1.48
PHC3-212	ENST00000490723	MFAP3L	O75121	409 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	ZXDA	P98168	799 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	FAP	Q12884	760 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	RRP1B	Q14684	758 aa	Known RBP	5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	TOR2A	Q5JU69	321 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	MFSD5	Q6N075	450 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723		Q6ZRM9	215 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	ZNF662	Q6ZS27	426 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	IL17D	Q8TAD2	202 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	PGBD4	Q96DM1	585 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	ZNF747	Q9BV97	191 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	ZNF341	Q9BYN7	854 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	CSRNP2	Q9H175	543 aa		5.8	□□□□□ -1.48
PHC3-212	ENST00000490723	HOXA3	O43365	443 aa	Predicted RBP	5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	TMEM127	O75204	238 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	GNAT2	P19087	354 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	SCNN1G	P51170	649 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	DGCR2	P98153	550 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	SRSF2	Q01130	221 aa	Known RBP	5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	FOXE3	Q13461	319 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	CNGB1	Q14028	1251 aa	Predicted RBP	5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	AUTS2	Q8WXX7	1259 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	IL17RA	Q96F46	866 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	PLEKHG4B	Q96PX9	1271 aa		5.79	□□□□□ -1.48
PHC3-212	ENST00000490723	IPO13	O94829	963 aa	Known RBP	5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	C1S	P09871	688 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	C6	P13671	934 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	HK1	P19367	917 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	CTSS	P25774	331 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	MAN2A2	P49641	1150 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	WNT3A	P56704	352 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	MRPS9	P82933	396 aa	Known RBP	5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	TSPEAR	Q8WU66	669 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	SNX33	Q8WV41	574 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	ST8SIA2	Q92186	375 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	GPR87	Q9BY21	358 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	ENKD1	Q9H0I2	346 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	DNAJC28	Q9NX36	388 aa		5.78	□□□□□ -1.48
PHC3-212	ENST00000490723	SLC5A4	Q9NY91	659 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms