RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
ACTN4-206ENST00000489451 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 CXCL14O95715 111 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 CTSAP10619 480 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
ACTN4-206ENST00000489451 CDC42EP1Q00587 391 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 NR5A1Q13285 461 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
ACTN4-206ENST00000489451 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
ACTN4-206ENST00000489451 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
ACTN4-206ENST00000489451 TMEM169Q96HH4 297 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 FAM20AQ96MK3 541 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 LXNQ9BS40 222 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 MYO15AQ9UKN7 3530 aa13.16□□□□□ -0.3
ACTN4-206ENST00000489451 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 LILRB3O75022 631 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 BRD1O95696 1058 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 DNM2P50570 870 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 LAMTOR4Q0VGL1 99 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 EPHA7Q15375 998 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
ACTN4-206ENST00000489451 DYDC2Q96IM9 177 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.3
ACTN4-206ENST00000489451 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 TBX3O15119 743 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 EFEMP2O95967 443 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 AVPR2P30518 371 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 RAB27AP51159 221 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 AK2P54819 239 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 ITIH3Q06033 890 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 EMC2Q15006 297 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 KIAA1841Q6NSI8 718 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 INO80BQ9C086 356 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-206ENST00000489451 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
ACTN4-206ENST00000489451 F8W810 466 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 TSPAN1O60635 241 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 SLITRK3O94933 977 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 ASGR2P07307 311 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 SKIP12755 728 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 RFC5P40937 340 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 NBL1P41271 181 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 AMHR2Q16671 573 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 ME3Q16798 604 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 TAS1R1Q7RTX1 841 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 RNF168Q8IYW5 571 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-206ENST00000489451 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 KREMEN2Q8NCW0 462 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
ACTN4-206ENST00000489451 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-206ENST00000489451 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-206ENST00000489451 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-206ENST00000489451 PPME1Q9Y570 386 aa13.13□□□□□ -0.31
ACTN4-206ENST00000489451 NRP1O14786 923 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 INPPL1O15357 1258 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 CDKL5O76039 1030 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 POMCP01189 267 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
ACTN4-206ENST00000489451 CA8P35219 290 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 CLCN4P51793 760 aa13.12□□□□□ -0.31
ACTN4-206ENST00000489451 PTENP60484 403 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms