RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ST20-MTHFSA0A0A6YYL1 179 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 KLHL33A6NCF5 533 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 XPOTO43592 962 aaKnown RBP5.57□□□□□ -1.52
XRN1-213ENST00000489241 ZRANB2O95218 330 aaKnown RBP eCLIP5.57□□□□□ -1.52
XRN1-213ENST00000489241 CYP2C19P33261 490 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 RGS3P49796 1198 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 MINDY4Q4G0A6 757 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 GORABQ5T7V8 394 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 EFCAB2Q5VUJ9 269 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 KIAA1841Q6NSI8 718 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 LRSAM1Q6UWE0 723 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 KSR2Q6VAB6 950 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 GPR155Q7Z3F1 870 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 PALM2Q8IXS6 379 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 TGFBRAP1Q8WUH2 860 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 FERMT2Q96AC1 680 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 CLIP3Q96DZ5 547 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 NUP88Q99567 741 aaPredicted RBP5.57□□□□□ -1.52
XRN1-213ENST00000489241 MYL10Q9BUA6 226 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 KATNBL1Q9H079 304 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 WNT8AQ9H1J5 351 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 CCM2LQ9NUG4 571 aaPredicted RBP5.57□□□□□ -1.52
XRN1-213ENST00000489241 SYNPO2Q9UMS6 1093 aa5.57□□□□□ -1.52
XRN1-213ENST00000489241 MUSKO15146 869 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 CUTAO60888 179 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 CD83Q01151 205 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 HDAC1Q13547 482 aaPredicted RBP5.56□□□□□ -1.52
XRN1-213ENST00000489241 MOGSQ13724 837 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 GTF2H3Q13889 308 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 NOLC1Q14978 699 aaKnown RBP eCLIP5.56□□□□□ -1.52
XRN1-213ENST00000489241 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
XRN1-213ENST00000489241 CLUL1Q15846 466 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 ZNF568Q3ZCX4 644 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 GRAMD4Q6IC98 578 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 PPP4R4Q6NUP7 873 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 CRIP3Q6Q6R5 217 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 OTOP2Q7RTS6 562 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 SLC16A11Q8NCK7 471 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 JADE3Q92613 823 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 TIFAQ96CG3 184 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 TEKT5Q96M29 485 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 WWC2-AS2Q96NR7 200 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 POFUT1Q9H488 388 aa5.56□□□□□ -1.52
XRN1-213ENST00000489241 A0A0G2JNJ9 132 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
XRN1-213ENST00000489241 ZNF623O75123 536 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 MAFO75444 373 aaPredicted RBP5.55□□□□□ -1.52
XRN1-213ENST00000489241 IL33O95760 270 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 FSHBP01225 129 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 POLD1P28340 1107 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 USP10Q14694 798 aaKnown RBP5.55□□□□□ -1.52
XRN1-213ENST00000489241 MYBPC3Q14896 1274 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 ACAP2Q15057 778 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 KANK2Q63ZY3 851 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 KANSL1Q7Z3B3 1105 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 CXorf67Q86X51 503 aaPredicted RBP5.55□□□□□ -1.52
XRN1-213ENST00000489241 SMC5Q8IY18 1101 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 Q8TCH9 128 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 RSAD2Q8WXG1 361 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 LMF1Q96S06 567 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 PRDM11Q9NQV5 511 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 KCMF1Q9P0J7 381 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 Q9UFV3 132 aa5.55□□□□□ -1.52
XRN1-213ENST00000489241 MYPNQ86TC9 1320 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 TRIM27P14373 513 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 VCAM1P19320 739 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 ENPP1P22413 925 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 ADCY8P40145 1251 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 GDF5P43026 501 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 GBX1Q14549 363 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 GRM3Q14832 879 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
XRN1-213ENST00000489241 DGKDQ16760 1214 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 UGT8Q16880 541 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 HS1BP3Q53T59 392 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 RRP12Q5JTH9 1297 aaKnown RBP5.54□□□□□ -1.52
XRN1-213ENST00000489241 Q8N1X5 172 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 SAMD3Q8N6K7 520 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 LRRC37BQ96QE4 947 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 MPHOSPH6Q99547 160 aaKnown RBP5.54□□□□□ -1.52
XRN1-213ENST00000489241 CARD11Q9BXL7 1154 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 ZNF700Q9H0M5 742 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 VPS11Q9H270 941 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 ZNF277Q9NRM2 450 aaPredicted RBP5.54□□□□□ -1.52
XRN1-213ENST00000489241 SAE1Q9UBE0 346 aaPredicted RBP5.54□□□□□ -1.52
XRN1-213ENST00000489241 TESMINQ9Y4I5 508 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 NUMBLQ9Y6R0 609 aa5.54□□□□□ -1.52
XRN1-213ENST00000489241 PRSS38A1L453 326 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 ERC2O15083 957 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 EIF3JO75822 258 aaKnown RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 ZNF888P0CJ79 500 aaPredicted RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 AGXTP21549 392 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 MTNR1BP49286 362 aa5.53□□□□□ -1.52
XRN1-213ENST00000489241 MANFP55145 182 aaKnown RBP5.53□□□□□ -1.52
XRN1-213ENST00000489241 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms