RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MRPL4Q9BYD3 311 aaKnown RBP10.95□□□□□ -0.66
USP11-211ENST00000489111 INO80BQ9C086 356 aaPredicted RBP10.95□□□□□ -0.66
USP11-211ENST00000489111 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
USP11-211ENST00000489111 PCIF1Q9H4Z3 704 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 DMAC2Q9NW81 257 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP11-211ENST00000489111 PTCH2Q9Y6C5 1203 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 ZNFX1Q9P2E3 1918 aaKnown RBP10.95□□□□□ -0.66
USP11-211ENST00000489111 ANKRD63C9JTQ0 380 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 KIAA0391O15091 583 aaKnown RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 PIGRP01833 764 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 AFPP02771 609 aaKnown RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 VTNP04004 478 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 GJB1P08034 283 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 CYP2C9P11712 490 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 GARTP22102 1010 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 CST5P28325 142 aaPredicted RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 PBX1P40424 430 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 PTENP60484 403 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 C1QTNF8P60827 252 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 NKX3-2P78367 333 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 CDC42EP1Q00587 391 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 SYCP1Q15431 976 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 MARCH8Q5T0T0 291 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 SLFN12LQ6IEE8 588 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 ZPBP2Q6X784 338 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 ZNF410Q86VK4 478 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 TMEM174Q8WUU8 243 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 PPP1R16BQ96T49 567 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 TARS2Q9BW92 718 aaKnown RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 NFKBIZQ9BYH8 718 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 CCDC113Q9H0I3 377 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 HMX1Q9NP08 348 aaPredicted RBP10.94□□□□□ -0.66
USP11-211ENST00000489111 ANKFY1Q9P2R3 1169 aa10.94□□□□□ -0.66
USP11-211ENST00000489111 ARID2Q68CP9 1835 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 SMIM35A0A1B0GVV1 85 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 MAPK13O15264 365 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 TRIM21P19474 475 aaKnown RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 POU5F1BQ06416 359 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 PRPF4BQ13523 1007 aaKnown RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 SNRNP35Q16560 246 aaKnown RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 FAM47CQ5HY64 1035 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 SLC39A4Q6P5W5 647 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 USP37Q86T82 979 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 KIAA0319LQ8IZA0 1049 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 RDH13Q8NBN7 331 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 PPP1R13LQ8WUF5 828 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 IQCDQ96DY2 449 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 SAAL1Q96ER3 474 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 ERGIC2Q96RQ1 377 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 MSTO1Q9BUK6 570 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 KIAA1586Q9HCI6 787 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 PRMT7Q9NVM4 692 aaPredicted RBP10.93□□□□□ -0.66
USP11-211ENST00000489111 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 HDAC6Q9UBN7 1215 aa10.93□□□□□ -0.66
USP11-211ENST00000489111 MGAMO43451 1857 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 A0A087WZ62 844 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 GOLGA8IPA6NC78 632 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 GOLGA8JA6NMD2 632 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 AKR1B15C9JRZ8 316 aaPredicted RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 EXTL3O43909 919 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 STX10O60499 249 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 N4BP1O75113 896 aaKnown RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 TOM1L1O75674 476 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 CABYRO75952 493 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 ERLIN2O94905 339 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 ASGR1P07306 291 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 HARSP12081 509 aaKnown RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 ADSSP30520 456 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 GPC3P51654 580 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 NLRP11P59045 1033 aaKnown RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 BFSP1Q12934 665 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 TBX2Q13207 712 aaPredicted RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 KCNA10Q16322 511 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 TAF2Q6P1X5 1199 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 RUFY4Q6ZNE9 571 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 CNGA4Q8IV77 575 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 KLHDC9Q8NEP7 349 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 SLC35C1Q96A29 364 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 VTI1AQ96AJ9 217 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 FDXACB1Q9BRP7 624 aaPredicted RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 FAM213AQ9BRX8 229 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 TCHPQ9BT92 498 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 AGO2Q9UKV8 859 aaKnown RBP10.92□□□□□ -0.66
USP11-211ENST00000489111 STYXL1Q9Y6J8 313 aa10.92□□□□□ -0.66
USP11-211ENST00000489111 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP11-211ENST00000489111 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms