RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ADPGKQ9BRR6 497 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 TRAIPQ9BWF2 469 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 NT5C3AQ9H0P0 336 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 BHMT2Q9H2M3 363 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 NGRNQ9NPE2 291 aaKnown RBP10.1□□□□□ -0.79
HDAC6-232ENST00000489053 XPNPEP1Q9NQW7 623 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 LZTS1Q9Y250 596 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 SIP14410 1827 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 NCOR1O75376 2440 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PTPRSQ13332 1948 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 N4BP3O15049 544 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 TSPAN1O60635 241 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 ZNF623O75123 536 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 LINC00271P0C7V0 271 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 BMP1P13497 986 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CYP11B2P19099 503 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 GLRA2P23416 452 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PBX3P40426 434 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 UBA7P41226 1012 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 EFNA5P52803 228 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 BCAR1P56945 870 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 MBTD1Q05BQ5 628 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 HYAL1Q12794 435 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
HDAC6-232ENST00000489053 SMC1AQ14683 1233 aaKnown RBP10.09□□□□□ -0.79
HDAC6-232ENST00000489053 SLC27A1Q6PCB7 646 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
HDAC6-232ENST00000489053 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CALML4Q96GE6 196 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PRIMPOLQ96LW4 560 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CDCA3Q99618 268 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-232ENST00000489053 NFKBIZQ9BYH8 718 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 BACH2Q9BYV9 841 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CSRNP2Q9H175 543 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 CWH43Q9H720 699 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 MINDY3Q9H8M7 445 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 GPRC5CQ9NQ84 441 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PARP2Q9UGN5 583 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 EVPLQ92817 2033 aa10.09□□□□□ -0.79
HDAC6-232ENST00000489053 PHLPP2Q6ZVD8 1323 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 NPTXRO95502 500 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 EYA4O95677 639 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 POMCP01189 267 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 PRKCBP05771 671 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 TXLNAP40222 546 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 NAMPTP43490 491 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 TOB1P50616 345 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 PLCB3Q01970 1234 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 ARL6IP4Q66PJ3 421 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 LRRC55Q6ZSA7 311 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 EFHBQ8N7U6 833 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 IGSF22Q8N9C0 903 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 NECAB3Q96P71 396 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 POP1Q99575 1024 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.08□□□□□ -0.8
HDAC6-232ENST00000489053 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 CD207Q9UJ71 328 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 IPPQ9Y573 584 aa10.08□□□□□ -0.8
HDAC6-232ENST00000489053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 ARL5CA6NH57 179 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 PP2D1A8MPX8 630 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 PER2O15055 1255 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 OFD1O75665 1012 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 ALDH2P05091 517 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 ATF7P17544 494 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 DNAJB1P25685 340 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 IRS1P35568 1242 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 MLH1P40692 756 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 OR1G1P47890 313 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 SMTNP53814 917 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 GIT2Q14161 759 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 KIAA1841Q6NSI8 718 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 LLGL2Q6P1M3 1020 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 ELMSAN1Q6PJG2 1045 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 CABP7Q86V35 215 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-232ENST00000489053 VPS52Q8N1B4 723 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 C4orf32Q8N8J7 132 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 AK8Q96MA6 479 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
HDAC6-232ENST00000489053 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms