RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 NOP9Q86U38 636 aaKnown RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 KIF18BQ86Y91 864 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 PALM2Q8IXS6 379 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 RTKN2Q8IZC4 609 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 GIMAP8Q8ND71 665 aaPredicted RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 SMC1BQ8NDV3 1235 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 OR5AN1Q8NGI8 311 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 OR14K1Q8NGZ2 314 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 RTF1Q92541 710 aaKnown RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 DVL3Q92997 716 aaPredicted RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 E2F7Q96AV8 911 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 MFSD3Q96ES6 412 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 TUBGCP5Q96RT8 1024 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 GPR20Q99678 358 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 CHMP4AQ9BY43 222 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 OR10A2Q9H208 303 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 SEMA4AQ9H3S1 761 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 TOMM22Q9NS69 142 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 THG1LQ9NWX6 298 aaKnown RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 PLAAQ9Y263 795 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 ZKSCAN5Q9Y2L8 839 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 MROH2AA6NES4 1674 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 KDM5AP29375 1690 aaKnown RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 IQGAP1P46940 1657 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 SMG6Q86US8 1419 aaKnown RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 NEURL4Q96JN8 1562 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 CENPJQ9HC77 1338 aaPredicted RBP3.67□□□□□ -1.82
CALD1-221ENST00000489019 KIAA1210Q9ULL0 1709 aa3.67□□□□□ -1.82
CALD1-221ENST00000489019 RIMBP3CA6NJZ7 1639 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 RIMBP3BA6NNM3 1639 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 CAMSAP1Q5T5Y3 1602 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 RIMBP3Q9UFD9 1639 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 ABCC3O15438 1527 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 LCHNA4D1U4 455 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 GSG1L2A8MUP6 293 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 C1QTNF3-AMACRE9PGA6 284 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 SMAD3P84022 425 aaKnown RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 MAP3K12Q12852 859 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 SAFB2Q14151 953 aaKnown RBP eCLIP3.66□□□□□ -1.82
CALD1-221ENST00000489019 PUM1Q14671 1186 aaKnown RBP eCLIP3.66□□□□□ -1.82
CALD1-221ENST00000489019 DBX2Q6ZNG2 339 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 ZNF662Q6ZS27 426 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 KANSL1Q7Z3B3 1105 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 GPR135Q8IZ08 494 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 PPM1KQ8N3J5 372 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 EFHBQ8N7U6 833 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 NKD2Q969F2 451 aaPredicted RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 PLA2G12BQ9BX93 195 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 HAPLN2Q9GZV7 340 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 C12orf65Q9H3J6 166 aaKnown RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 MS4A5Q9H3V2 200 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 POFUT1Q9H488 388 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 DEF6Q9H4E7 631 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 AGO3Q9H9G7 860 aaKnown RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 SPTLC3Q9NUV7 552 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 IFT57Q9NWB7 429 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 PUF60Q9UHX1 559 aaKnown RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 FAM184BQ9ULE4 1060 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 TSC22D4Q9Y3Q8 395 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 CTDP1Q9Y5B0 961 aaPredicted RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 NPATQ14207 1427 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 SYNMO15061 1565 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 FRMPD1Q5SYB0 1578 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 DIP2CQ9Y2E4 1556 aa3.66□□□□□ -1.82
CALD1-221ENST00000489019 CFAP65Q6ZU64 1925 aaKnown RBP3.66□□□□□ -1.82
CALD1-221ENST00000489019 ZC3H13Q5T200 1668 aaKnown RBP3.65□□□□□ -1.82
CALD1-221ENST00000489019 ADGRB3O60242 1522 aa3.65□□□□□ -1.82
CALD1-221ENST00000489019 LRPPRCP42704 1394 aaKnown RBP3.65□□□□□ -1.82
CALD1-221ENST00000489019 TSPOAP1O95153 1857 aa3.65□□□□□ -1.82
CALD1-221ENST00000489019 IFT172Q9UG01 1749 aa3.65□□□□□ -1.82
CALD1-221ENST00000489019 GLI2P10070 1586 aa3.65□□□□□ -1.82
CALD1-221ENST00000489019 TLDC2A0PJX2 215 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 C2orf78A6NCI8 922 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 ELL2O00472 640 aaPredicted RBP3.65□□□□□ -1.83
CALD1-221ENST00000489019 MATN3O15232 486 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PDE8AO60658 829 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 RAD17O75943 681 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PRPF6O94906 941 aaKnown RBP3.65□□□□□ -1.83
CALD1-221ENST00000489019 TNFRSF1AP19438 455 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PPP2R1AP30153 589 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 ADCYAP1R1P41586 468 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 SELENOPP49908 381 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 GYS2P54840 703 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 DGKDQ16760 1214 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PLEKHG4Q58EX7 1191 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 KLHDC10Q6PID8 442 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 Q6ZSN1 163 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 SPRED1Q7Z699 444 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 NME9Q86XW9 330 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PHYKPLQ8IUZ5 450 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 ANKRD13AQ8IZ07 590 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 ZNF496Q96IT1 587 aaPredicted RBP3.65□□□□□ -1.83
CALD1-221ENST00000489019 CCDC136Q96JN2 1154 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 GPR101Q96P66 508 aaPredicted RBP3.65□□□□□ -1.83
CALD1-221ENST00000489019 OR14A2Q96R54 314 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 MYL10Q9BUA6 226 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 PITHD1Q9GZP4 211 aaPredicted RBP3.65□□□□□ -1.83
CALD1-221ENST00000489019 SLC52A1Q9NWF4 448 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 KCMF1Q9P0J7 381 aa3.65□□□□□ -1.83
CALD1-221ENST00000489019 SAE1Q9UBE0 346 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms