RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ARHGEF35A5YM69 484 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 H3BQV1 296 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 LINC01565O15544 149 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 TSPAN1O60635 241 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 GLRA2P23416 452 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 HOXA11P31270 313 aaPredicted RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 PBX3P40426 434 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 ERVFC1P60507 584 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 DLX2Q07687 328 aaPredicted RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 PLPP4Q5VZY2 271 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 MCTP1Q6DN14 999 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 RBM23Q86U06 439 aaKnown RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 HACE1Q8IYU2 909 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 ASAP3Q8TDY4 903 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 POP1Q99575 1024 aaKnown RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 LRWD1Q9UFC0 647 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 BDP1A6H8Y1 2624 aa15.32■□□□□ 0.04
SPTLC1-207ENST00000488921 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 MBTPS2O43462 519 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 OFD1O75665 1012 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 NCLP19338 710 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 GJB2P29033 226 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 PRPHP41219 470 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 MBTD1Q05BQ5 628 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 PTGDRQ13258 359 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 PDIA5Q14554 519 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 NBR1Q14596 966 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 SMAD2Q15796 467 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 CLUL1Q15846 466 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 DUSP6Q16828 381 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 TMC7Q7Z402 723 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 ZBTB8OSQ8IWT0 167 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 GJD3Q8N144 294 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 MSLNLQ96KJ4 702 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 C1QTNF1Q9BXJ1 281 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
SPTLC1-207ENST00000488921 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 ITGA4P13612 1032 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 TOB1P50616 345 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 COASYQ13057 564 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 UBXN11Q5T124 520 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 PADI6Q6TGC4 694 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 ADHFE1Q8IWW8 467 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 SMRP1Q8NCR6 262 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 FAM193BQ96PV7 902 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 CSRNP2Q9H175 543 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 NRDE2Q9H7Z3 1164 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 PRMT7Q9NVM4 692 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 SMC3Q9UQE7 1217 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 IPPQ9Y573 584 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 PCDHB6Q9Y5E3 794 aa15.3■□□□□ 0.04
SPTLC1-207ENST00000488921 MYH11P35749 1972 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 ZMYM2Q9UBW7 1377 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 A0A087WWV3 80 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 NT5C1B-RDH14C9J2C7 533 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 CD2BP2O95400 341 aaKnown RBP15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 EYA4O95677 639 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 GLP2RO95838 553 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 ZP2Q05996 745 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 GIT2Q14161 759 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 AMHR2Q16671 573 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 CDCA2Q69YH5 1023 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 SLC27A1Q6PCB7 646 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 DTHD1Q6ZMT9 781 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 CLEC1BQ9P126 229 aa15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 BARX2Q9UMQ3 279 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1-207ENST00000488921 PER2O15055 1255 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 GALTP07902 379 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 CYP11B2P19099 503 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 CA8P35219 290 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 NAMPTP43490 491 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 TMEM184AQ6ZMB5 413 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms