RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CYP26A1O43174 497 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ADRB2P07550 413 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 SKOR1P84550 965 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ODF2Q5BJF6 829 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 PPM1KQ8N3J5 372 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 LARGE2Q8N3Y3 721 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 SEMA4DQ92854 862 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ATP6V1G3Q96LB4 118 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 INTUQ9ULD6 942 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ZNF536O15090 1300 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ATP8B3O60423 1300 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 H0YGN5 161 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ATP2C2O75185 946 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 MMEP08473 750 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 GUCY2CP25092 1073 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 CAP2P40123 477 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 PLTPP55058 493 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 PPATQ06203 517 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 FAM102BQ5T8I3 360 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 SCARA3Q6AZY7 606 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
CLIC4-202ENST00000488683 CHURC1Q8WUH1 139 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 MXRA8Q9BRK3 442 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 TRIM7Q9C029 511 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 DNAJC17Q9NVM6 304 aaKnown RBP13.71□□□□□ -0.21
CLIC4-202ENST00000488683 ALG6Q9Y672 507 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 NFS1Q9Y697 457 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 LOXHD1Q8IVV2 1947 aa13.71□□□□□ -0.22
CLIC4-202ENST00000488683 NCANO14594 1321 aa13.71□□□□□ -0.22
CLIC4-202ENST00000488683 UBE4BO95155 1302 aa13.71□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 EBAG9O00559 213 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 ATP8B4Q8TF62 1192 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 RFFLQ8WZ73 363 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
CLIC4-202ENST00000488683 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
CLIC4-202ENST00000488683 DHX15O43143 795 aaKnown RBP13.7□□□□□ -0.22
CLIC4-202ENST00000488683 TMEM253P0C7T8 217 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 LMNB1P20700 586 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 SLCO1A2P46721 670 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 QPCTQ16769 361 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 NOP9Q86U38 636 aaKnown RBP13.7□□□□□ -0.22
CLIC4-202ENST00000488683 CD302Q8IX05 232 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 GMLQ99445 158 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 AGPAT1Q99943 283 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 VAMP7P51809 220 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 SETQ01105 290 aaPredicted RBP13.7□□□□□ -0.22
CLIC4-202ENST00000488683 PPP2R5AQ15172 486 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 TTC27Q6P3X3 843 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 LMBR1Q8WVP7 490 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 TMBIM4Q9HC24 238 aa13.7□□□□□ -0.22
CLIC4-202ENST00000488683 RARRES1P49788 294 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 POU5F1Q01860 360 aaKnown RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 SPRED3Q2MJR0 410 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 KCND2Q9NZV8 630 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 DOCK5Q9H7D0 1870 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 DLATP10515 647 aaKnown RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 HSD17B4P51659 736 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 SNX1Q13596 522 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 FAM182AQ5T1J6 154 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
CLIC4-202ENST00000488683 KDM7AQ6ZMT4 941 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 HAUS6Q7Z4H7 955 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 CLEC4DQ8WXI8 215 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
CLIC4-202ENST00000488683 ZNFX1Q9P2E3 1918 aaKnown RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC188H7C350 402 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CLSTN1O94985 981 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CCNE2O96020 404 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 MYZAPP0CAP1 466 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 PYGMP11217 842 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CHRNB2P17787 502 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 COMTP21964 271 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 MUTP22033 750 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 ADSSP30520 456 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 PTGER2P43116 358 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 MAGEA9P43362 315 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 TRAF1Q13077 416 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CUL1Q13616 776 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 KIF22Q14807 665 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 TRIP13Q15645 432 aaPredicted RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 TKFCQ3LXA3 575 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 OGFOD1Q8N543 542 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms