RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
RER1-207ENST00000488353 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
RER1-207ENST00000488353 DAAM1Q9Y4D1 1078 aa15.32■□□□□ 0.04
RER1-207ENST00000488353 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 A8MUI8 341 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 O00370 1275 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 FGGP02679 453 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 SLC9A1P19634 815 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 PTENP60484 403 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 ARSHQ5FYA8 562 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
RER1-207ENST00000488353 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
RER1-207ENST00000488353 IRF2BP2Q7Z5L9 587 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 NT5DC3Q86UY8 548 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 KIF2BQ8N4N8 673 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 HES6Q96HZ4 224 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 FAM167BQ9BTA0 163 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 GANQ9H2C0 597 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 A0A0A6YYK5 440 aaPredicted RBP15.31■□□□□ 0.04
RER1-207ENST00000488353 SMIM23A6NLE4 172 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 WFS1O76024 890 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
RER1-207ENST00000488353 PSMC6P62333 389 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 JAG1P78504 1218 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 DR1Q01658 176 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 CNGA2Q16280 664 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 PPP1R18Q6NYC8 613 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 ASRGL1Q7L266 308 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 TMEM109Q9BVC6 243 aa15.31■□□□□ 0.04
RER1-207ENST00000488353 GREB1LQ9C091 1923 aaPredicted RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 ATP8B3O60423 1300 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 CETN3O15182 167 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 HIP1RO75146 1068 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 NR2F2P24468 414 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 PAPOLAP51003 745 aaKnown RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 RAB27AP51159 221 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 DRG2P55039 364 aaKnown RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 NPEPPSP55786 919 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 FKBP1AP62942 108 aaKnown RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 KLRC3Q07444 240 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 APLFQ8IW19 511 aaPredicted RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 MFN1Q8IWA4 741 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 DYDC1Q8WWB3 177 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 TSC22D3Q99576 134 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
RER1-207ENST00000488353 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
RER1-207ENST00000488353 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 ABLIM1O14639 778 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 PLTPP55058 493 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 PABPC4Q13310 644 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■□□□□ 8.9
RER1-207ENST00000488353 CCDC38Q502W7 563 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 HYIQ5T013 277 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 TRIM7Q9C029 511 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 PAPOLBQ9NRJ5 636 aaKnown RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 ARL2BPQ9Y2Y0 163 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 LRRC42Q9Y546 428 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 FAM170AA1A519 330 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 RAD17O75943 681 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 TAL1P17542 331 aaPredicted RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 ANXA13P27216 316 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 GBP1P32455 592 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 RPS6KA3P51812 740 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 PRR16Q569H4 304 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 TNFAIP8L3Q5GJ75 292 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
RER1-207ENST00000488353 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
RER1-207ENST00000488353 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 GJB6O95452 261 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 SKIV2L2P42285 1042 aaKnown RBP15.28■□□□□ 0.04
RER1-207ENST00000488353 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 DHX34Q14147 1143 aaKnown RBP15.28■□□□□ 0.04
RER1-207ENST00000488353 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
RER1-207ENST00000488353 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 DCAF17Q5H9S7 520 aaPredicted RBP15.28■□□□□ 0.04
RER1-207ENST00000488353 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 VPS36Q86VN1 386 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 RAB3IPQ96QF0 476 aaPredicted RBP15.28■□□□□ 0.04
RER1-207ENST00000488353 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 INTUQ9ULD6 942 aa15.28■□□□□ 0.04
RER1-207ENST00000488353 SRCAPQ6ZRS2 3230 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms