RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 TMCO4Q5TGY1 634 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 OR6B2Q6IFH4 312 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 RAB20Q9NX57 234 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 TEX33O43247 280 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 DGAT1O75907 488 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 ACOT2P49753 483 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 MRPL4Q9BYD3 311 aaKnown RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 POLIQ9UNA4 740 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 PDHXO00330 501 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 MFAP3LO75121 409 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 RFX1P22670 979 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 IRX4P78413 519 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 P3H4Q92791 437 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 DAAM1Q9Y4D1 1078 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 BZW2Q9Y6E2 419 aaKnown RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 VGLL4Q14135 290 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 NME8Q8N427 588 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 CYP2W1Q8TAV3 490 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 ABTB1Q969K4 478 aaPredicted RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 SEL1LQ9UBV2 794 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 AGO2Q9UKV8 859 aaKnown RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 GAKO14976 1311 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 SKIP12755 728 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ITIH3Q06033 890 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 SURF1Q15526 300 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 DBN1Q16643 649 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 LGSNQ5TDP6 509 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MAGOHBQ96A72 148 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 CNOT10Q9H9A5 744 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 RBAKQ9NYW8 714 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 TBX3O15119 743 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 EVI5O60447 810 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 STK10O94804 968 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 VAMP7P51809 220 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 NAALADL2Q58DX5 795 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 FBXW10Q5XX13 1052 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 WDR24Q96S15 920 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ELAC2Q9BQ52 826 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 SPATC1LQ9H0A9 340 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIAA1683Q9H0B3 1180 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MAPK4P31152 587 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 IL9RQ01113 521 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF699Q32M78 642 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 C15orf52Q6ZUT6 534 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 RIT2Q99578 217 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIFC3Q9BVG8 833 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 NHEJ1Q9H9Q4 299 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PPFIA2O75334 1257 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PRKCBP05771 671 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 RARBP10826 455 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 TCF7P36402 384 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ACTR2P61160 394 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 DGKZQ13574 1117 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PKN1Q16512 942 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ARMC2Q8NEN0 867 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 MIS12Q9H081 205 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
LDLRAP1-207ENST00000488127 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 PGRMC1O00264 195 aaKnown RBP12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 IRF6O14896 467 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 PLEKHH3Q7Z736 793 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 SEPT10Q9P0V9 454 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 MRFAP1Q9Y605 127 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 VSNL1P62760 191 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms