RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-217ENST00000487825 H0Y858 1186 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 RASGRP1O95267 797 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 CHGBP05060 677 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 ADAM17P78536 824 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 MAP2K1Q02750 393 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-217ENST00000487825 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 ZC3H12BQ5HYM0 836 aaKnown RBP6.49□□□□□ -1.37
BRCA1-217ENST00000487825 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 MAGEB10Q96LZ2 347 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-217ENST00000487825 SMURF1Q9HCE7 757 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 COQ6Q9Y2Z9 468 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 MEGF6O75095 1541 aa6.49□□□□□ -1.37
BRCA1-217ENST00000487825 PRAMEF25A6NGN4 478 aa6.48□□□□□ -1.37
BRCA1-217ENST00000487825 PUM1Q14671 1186 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-217ENST00000487825 ZXDCQ2QGD7 858 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-217ENST00000487825 RALYLQ86SE5 291 aaKnown RBP6.48□□□□□ -1.37
BRCA1-217ENST00000487825 MKL1Q969V6 931 aa6.48□□□□□ -1.37
BRCA1-217ENST00000487825 TTC21AQ8NDW8 1320 aa6.48□□□□□ -1.37
BRCA1-217ENST00000487825 MYH14Q7Z406 1995 aaKnown RBP6.48□□□□□ -1.37
BRCA1-217ENST00000487825 CACNA1SQ13698 1873 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 RASSF10A6NK89 507 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 EFCAB14O75071 495 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 APPP05067 770 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 GJA4P35212 333 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 SEC23AQ15436 765 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 DALRD3Q5D0E6 543 aaKnown RBP6.47□□□□□ -1.37
BRCA1-217ENST00000487825 CPZQ66K79 652 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 GSTCDQ8NEC7 633 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 ZSWIM2Q8NEG5 633 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-217ENST00000487825 BORCS6Q96GS4 357 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 SCLYQ96I15 445 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 SFMBT1Q9UHJ3 866 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 PTPN22Q9Y2R2 807 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 TTC21BQ7Z4L5 1316 aa6.47□□□□□ -1.37
BRCA1-217ENST00000487825 MKI67P46013 3256 aaKnown RBP6.46□□□□□ -1.37
BRCA1-217ENST00000487825 SZT2Q5T011 3432 aa6.46□□□□□ -1.37
BRCA1-217ENST00000487825 SCDO00767 359 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 GPR42O15529 346 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 C4BPAP04003 597 aaKnown RBP6.46□□□□□ -1.38
BRCA1-217ENST00000487825 MC4RP32245 332 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 CSF2RBP32927 897 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 EPHB4P54760 987 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 LACTBP83111 547 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-217ENST00000487825 ICAM4Q14773 271 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 CIR1Q86X95 450 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-217ENST00000487825 LILRB2Q8N423 598 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 AJUBAQ96IF1 538 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 PTCH2Q9Y6C5 1203 aa6.46□□□□□ -1.38
BRCA1-217ENST00000487825 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
BRCA1-217ENST00000487825 ARFGEF2Q9Y6D5 1785 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 CLASP2O75122 1294 aaKnown RBP6.45□□□□□ -1.38
BRCA1-217ENST00000487825 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-217ENST00000487825 ZNF20P17024 532 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 AOAHP28039 575 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 WDR72Q3MJ13 1102 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 C2orf27AQ580R0 203 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 FSTL4Q6MZW2 842 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 DPP8Q6V1X1 898 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-217ENST00000487825 BRAPQ7Z569 592 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 FGD2Q7Z6J4 655 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 TTC9BQ8N6N2 239 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 GCC1Q96CN9 775 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 MPHOSPH9Q99550 1183 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 OSBPL2Q9H1P3 480 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
BRCA1-217ENST00000487825 CNOT4O95628 575 aaKnown RBP6.44□□□□□ -1.38
BRCA1-217ENST00000487825 MMEP08473 750 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 PTGS1P23219 599 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 ADCY8P40145 1251 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
BRCA1-217ENST00000487825 USP10Q14694 798 aaKnown RBP6.44□□□□□ -1.38
BRCA1-217ENST00000487825 TM4SF20Q53R12 229 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 TRIM61Q5EBN2 209 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 SLFN13Q68D06 897 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 ZCRB1Q8TBF4 217 aaKnown RBP6.44□□□□□ -1.38
BRCA1-217ENST00000487825 SREK1Q8WXA9 508 aaKnown RBP6.44□□□□□ -1.38
BRCA1-217ENST00000487825 LRRC37BQ96QE4 947 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 KATNBL1Q9H079 304 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 MEGF9Q9H1U4 602 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 UCKL1Q9NWZ5 548 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 GALNT8Q9NY28 637 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 A0A0C4DFX4 3053 aa6.44□□□□□ -1.38
BRCA1-217ENST00000487825 CUL9Q8IWT3 2517 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 TCRBV16S1A1N1A0A5B0 115 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 RRADP55042 308 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 IL13RA1P78552 427 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 TMF1P82094 1093 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 DEFB115Q30KQ5 88 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 REXO1L1PQ8IX06 675 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 IFNL2Q8IZJ0 200 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms