RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SLC5A5Q92911 643 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 PUS7LQ9H0K6 701 aaKnown RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 RIOX1Q9H6W3 641 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 EMC7Q9NPA0 242 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 SLC5A4Q9NY91 659 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 USP36Q9P275 1121 aaKnown RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 MAGEL2Q9UJ55 1249 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 CTDP1Q9Y5B0 961 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 FAM83GA6ND36 823 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 MASP2O00187 686 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 LMNAP02545 664 aaKnown RBP5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 SDHAP31040 664 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 ADCYAP1R1P41586 468 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 GUCY2FP51841 1108 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 GPR158Q5T848 1215 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 FSTL4Q6MZW2 842 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 ANKRD53Q8N9V6 530 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 GBP4Q96PP9 640 aa5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 NOC2LQ9Y3T9 749 aaKnown RBP5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 RBM8AQ9Y5S9 174 aaKnown RBP5.08□□□□□ -1.6
HMGB1P36-201ENST00000487709 ST20-MTHFSA0A0A6YYL1 179 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 GOLGA8BA8MQT2 603 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 RHOBTB3O94955 611 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 S100BP04271 92 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 ADCY7P51828 1080 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 BPIFB4P59827 614 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 PHC1P78364 1004 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 MAP3K12Q12852 859 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 LRRC32Q14392 662 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 EPHA7Q15375 998 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 KLHDC10Q6PID8 442 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 STRA8Q7Z7C7 330 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 BCL6BQ8N143 479 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 SYNE4Q8N205 404 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 ZNF276Q8N554 614 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 MB21D1Q8N884 522 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 DLG3Q92796 817 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 ERCC4Q92889 916 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 GCDHQ92947 438 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 SLC7A6OSQ96CW6 309 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 MTMR8Q96EF0 704 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 GPHA2Q96T91 129 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 METTL14Q9HCE5 456 aaKnown RBP5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 ASB1Q9Y576 335 aa5.07□□□□□ -1.6
HMGB1P36-201ENST00000487709 UBA6A0AVT1 1052 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 EYA4O95677 639 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 SLC9A1P19634 815 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 APEX1P27695 318 aaKnown RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 EXOSC10Q01780 885 aaKnown RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 ROM1Q03395 351 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 ITKQ08881 620 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 FAM50AQ14320 339 aaKnown RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 RABL3Q5HYI8 236 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 TTC38Q5R3I4 469 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 ZKSCAN2Q63HK3 967 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 FAM111BQ6SJ93 734 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 FRMD7Q6ZUT3 714 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 PHYKPLQ8IUZ5 450 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 AMOTL1Q8IY63 956 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 ZNF610Q8N9Z0 462 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 PROKR1Q8TCW9 393 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 RPGRQ92834 1020 aaKnown RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 FERMT2Q96AC1 680 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 ELF4Q99607 663 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 SLC6A15Q9H2J7 730 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 DDX56Q9NY93 547 aaKnown RBP5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 PACSIN3Q9UKS6 424 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 VWA7Q9Y334 891 aa5.06□□□□□ -1.6
HMGB1P36-201ENST00000487709 XDHP47989 1333 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 KLRG2A4D1S0 409 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 RASSF10A6NK89 507 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 KDM1AO60341 852 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 H2AFYO75367 372 aaKnown RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 ZBTB48P10074 688 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 CDKN1CP49918 316 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 SMAD3P84022 425 aaKnown RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 BROXQ5VW32 411 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 ESPNLQ6ZVH7 1005 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 ELOA2Q8IYF1 753 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 ATXN2LQ8WWM7 1075 aaKnown RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 LPPQ93052 612 aa5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 AHCYL2Q96HN2 611 aaKnown RBP5.05□□□□□ -1.6
HMGB1P36-201ENST00000487709 C2orf78A6NCI8 922 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 PDGFRBP09619 1106 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 RABGGTBP53611 331 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 TCIRG1Q13488 830 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 PTPAQ15257 358 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 TERF2Q15554 542 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 LY6G5CQ5SRR4 150 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 FKBP15Q5T1M5 1219 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 PRAMEF9Q5VWM5 478 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 KCNV1Q6PIU1 500 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 RASSF3Q86WH2 238 aa5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P36-201ENST00000487709 LENG9Q96B70 501 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms