RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 ZSCAN20P17040 1043 aaPredicted RBP14.65□□□□□ -0.06
COL4A6-207ENST00000487645 FGFR4P22455 802 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 NMT1P30419 496 aaKnown RBP14.65□□□□□ -0.06
COL4A6-207ENST00000487645 STRN3Q13033 797 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 ALCAMQ13740 583 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 DSC3Q14574 896 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 AMHR2Q16671 573 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 KMT5BQ4FZB7 885 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 STXBP4Q6ZWJ1 553 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 GPT2Q8TD30 523 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 HERVK_113Q902F9 699 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL4A6-207ENST00000487645 KIFC3Q9BVG8 833 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 GTPBP4Q9BZE4 634 aaKnown RBP14.65□□□□□ -0.06
COL4A6-207ENST00000487645 UBE2OQ9C0C9 1292 aaKnown RBP14.65□□□□□ -0.06
COL4A6-207ENST00000487645 AGPAT5Q9NUQ2 364 aa14.65□□□□□ -0.06
COL4A6-207ENST00000487645 A0A1B0GUA9 196 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 K7ENM7 598 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 ENPP3O14638 875 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TSPAN1O60635 241 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PPP1R37O75864 691 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 RHOBTB3O94955 611 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PRKCBP05771 671 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 HOXA11P31270 313 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 SARSP49591 514 aaKnown RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PNOCQ13519 176 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PRPF4BQ13523 1007 aaKnown RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TCTN1Q2MV58 587 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 FAM26FQ5R3K3 315 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TAS1R3Q7RTX0 852 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 RTN4RL1Q86UN2 441 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 SMARCE1Q969G3 411 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TRAIPQ9BWF2 469 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 MTIF3Q9H2K0 278 aaKnown RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 RGS18Q9NS28 235 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 EXOC1Q9NV70 894 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-207ENST00000487645 RMND1Q9NWS8 449 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PCDH10Q9P2E7 1040 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 TBX20Q9UMR3 447 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 PCDHA5Q9Y5H7 936 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 CNTNAP2Q9UHC6 1331 aa14.64□□□□□ -0.07
COL4A6-207ENST00000487645 SKIP12755 728 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 ARF4P18085 180 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-207ENST00000487645 FAM189BP81408 668 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 NT5DC1Q5TFE4 455 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 NOTUMQ6P988 496 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 EPM2AIP1Q7L775 607 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-207ENST00000487645 OTOP2Q7RTS6 562 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 ZNF507Q8TCN5 953 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 ACO2Q99798 780 aaKnown RBP14.63□□□□□ -0.07
COL4A6-207ENST00000487645 ADAM2Q99965 735 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 MRPL4Q9BYD3 311 aaKnown RBP14.63□□□□□ -0.07
COL4A6-207ENST00000487645 CLSTN2Q9H4D0 955 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
COL4A6-207ENST00000487645 PIN4Q9Y237 131 aaKnown RBP14.63□□□□□ -0.07
COL4A6-207ENST00000487645 N4BP3O15049 544 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 EIF3DO15371 548 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL4A6-207ENST00000487645 B4GALT5O43286 388 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 MGEA5O60502 916 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 GCNT3O95395 438 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 PIGRP01833 764 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 ZC2HC1CQ53FD0 456 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-207ENST00000487645 L1TD1Q5T7N2 865 aaKnown RBP14.62□□□□□ -0.07
COL4A6-207ENST00000487645 RASIP1Q5U651 963 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 ZPBP2Q6X784 338 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 HPS3Q969F9 1004 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 ACCSQ96QU6 501 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 TMEM206Q9H813 350 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 KIAA1468Q9P260 1216 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 EXOC7Q9UPT5 735 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 TNFSF13BQ9Y275 285 aa14.62□□□□□ -0.07
COL4A6-207ENST00000487645 LAMA2P24043 3122 aaKnown RBP14.61□□□□□ -0.07
COL4A6-207ENST00000487645 PTPRSQ13332 1948 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 A0A0U1RQF3 1178 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-207ENST00000487645 C9IYK1 514 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 ZNF623O75123 536 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 MYBP10242 640 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 CASP5P51878 434 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 STK4Q13043 487 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 SHHQ15465 462 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 CAMK4Q16566 473 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 ATF7IP2Q5U623 682 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 TWF2Q6IBS0 349 aaKnown RBP14.61□□□□□ -0.07
COL4A6-207ENST00000487645 SLC27A1Q6PCB7 646 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-207ENST00000487645 MAP4K3Q8IVH8 894 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 PHOSPHO2Q8TCD6 241 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 LINC01599Q8WXQ3 324 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 CPB2Q96IY4 423 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 NUP62CLQ9H1M0 184 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 SLC39A2Q9NP94 309 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 SLC4A7Q9Y6M7 1214 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms