RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ZBTB8OSQ8IWT0 167 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 CNNM3Q8NE01 707 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 MRPS27Q92552 414 aaKnown RBP22.63■■□□□ 1.21
HDAC4-209ENST00000487617 NECAB3Q96P71 396 aaPredicted RBP22.63■■□□□ 1.21
HDAC4-209ENST00000487617 EIF2AQ9BY44 585 aaKnown RBP22.63■■□□□ 1.21
HDAC4-209ENST00000487617 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 RSAD1Q9HA92 442 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 TBC1D13Q9NVG8 400 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 LZTS1Q9Y250 596 aa22.63■■□□□ 1.21
HDAC4-209ENST00000487617 CNTNAP2Q9UHC6 1331 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 VWA3AA6NCI4 1184 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 E9PMD0 336 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 B4GALT5O43286 388 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 ZC3H11AO75152 810 aaKnown RBP eCLIP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 ARF4P18085 180 aaPredicted RBP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 NCLP19338 710 aaKnown RBP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 BCAR1P56945 870 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 ZRSR1Q15695 479 aaKnown RBP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 SLC39A11Q8N1S5 342 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 URGCPQ8TCY9 931 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 BSNDQ8WZ55 320 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 MMTAG2Q9BU76 263 aaKnown RBP22.62■■□□□ 1.21
HDAC4-209ENST00000487617 C2orf40Q9H1Z8 148 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 IPPQ9Y573 584 aa22.62■■□□□ 1.21
HDAC4-209ENST00000487617 NT5C1B-RDH14C9J2C7 533 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 TNFRSF10AO00220 468 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 EYA4O95677 639 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 ITGA4P13612 1032 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 NRIP1P48552 1158 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 ERVFC1P60507 584 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 PPP2R5AQ15172 486 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 CTC1Q2NKJ3 1217 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 CDCA2Q69YH5 1023 aaPredicted RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 PDE12Q6L8Q7 609 aaKnown RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 RBM23Q86U06 439 aaKnown RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 SMG8Q8ND04 991 aaKnown RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 DEPTORQ8TB45 409 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 TRIM6Q9C030 488 aaPredicted RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 GBP3Q9H0R5 595 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 NRDE2Q9H7Z3 1164 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 PRMT7Q9NVM4 692 aaPredicted RBP22.61■■□□□ 1.21
HDAC4-209ENST00000487617 VCANP13611 3396 aa22.61■■□□□ 1.21
HDAC4-209ENST00000487617 BRWD1Q9NSI6 2320 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 K7ELQ4 463 aaPredicted RBP22.6■■□□□ 1.21
HDAC4-209ENST00000487617 LINC01565O15544 149 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 NAMPTP43490 491 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 PLPP4Q5VZY2 271 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 PTCRAQ6ISU1 281 aaPredicted RBP22.6■■□□□ 1.21
HDAC4-209ENST00000487617 PPP4R3CPQ6ZMV5 832 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 CDR2LQ86X02 465 aaPredicted RBP22.6■■□□□ 1.21
HDAC4-209ENST00000487617 KIFAP3Q92845 792 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 INTS4Q96HW7 963 aaKnown RBP22.6■■□□□ 1.21
HDAC4-209ENST00000487617 IFT74Q96LB3 600 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 TCF25Q9BQ70 676 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 TLE6Q9H808 572 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 UBN1Q9NPG3 1134 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 ENTPD7Q9NQZ7 604 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 FOXD4L1Q9NU39 408 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 HES2Q9Y543 173 aa22.6■■□□□ 1.21
HDAC4-209ENST00000487617 TTC28Q96AY4 2481 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 FSCN2O14926 492 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 BMP15O95972 392 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 LIG1P18858 919 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 LTBRP36941 435 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 ADAM15Q13444 863 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 PUS10Q3MIT2 529 aaKnown RBP22.59■■□□□ 1.21
HDAC4-209ENST00000487617 KCNK18Q7Z418 384 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 PRIMPOLQ96LW4 560 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 APOL6Q9BWW8 343 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 RNF39Q9H2S5 420 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 FZD8Q9H461 694 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 KANSL3Q9P2N6 904 aa22.59■■□□□ 1.21
HDAC4-209ENST00000487617 PLXNA4Q9HCM2 1894 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 A0A1B0GUA9 196 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 CARNS1A5YM72 827 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 PER2O15055 1255 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 NPTXRO95502 500 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 POMCP01189 267 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 GALTP07902 379 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 NDUFV1P49821 464 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 AFF1P51825 1210 aaKnown RBP22.58■■□□□ 1.21
HDAC4-209ENST00000487617 DLX2Q07687 328 aaPredicted RBP22.58■■□□□ 1.21
HDAC4-209ENST00000487617 MAPK6Q16659 721 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 FAM187BQ17R55 369 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 TMEM132AQ24JP5 1023 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 SLC27A1Q6PCB7 646 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 ZNF280BQ86YH2 543 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 HACE1Q8IYU2 909 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 EFHBQ8N7U6 833 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 TMEM169Q96HH4 297 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 CDK5RAP3Q96JB5 506 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 FAM193BQ96PV7 902 aaPredicted RBP22.58■■□□□ 1.21
HDAC4-209ENST00000487617 PLIN2Q99541 437 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 NGRNQ9NPE2 291 aaKnown RBP22.58■■□□□ 1.21
HDAC4-209ENST00000487617 DNAJB4Q9UDY4 337 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 ATG2AQ2TAZ0 1938 aa22.58■■□□□ 1.21
HDAC4-209ENST00000487617 TCF20Q9UGU0 1960 aaKnown RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms