RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 NOMO2Q5JPE7 1267 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 AGMOQ6ZNB7 445 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 RBM23Q86U06 439 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
SPEN-205ENST00000487496 CNNM3Q8NE01 707 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 CPB2Q96IY4 423 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 TBC1D13Q9NVG8 400 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 SPG21Q9NZD8 308 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 NCOR1O75376 2440 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 ATG2AQ2TAZ0 1938 aa12.7□□□□□ -0.38
SPEN-205ENST00000487496 LRRIQ4A6NIV6 560 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 FSCN2O14926 492 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 B4GALT5O43286 388 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 TBX10O75333 385 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 IL9P15248 144 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
SPEN-205ENST00000487496 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
SPEN-205ENST00000487496 CDC25AP30304 524 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 NRIP1P48552 1158 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 ATP2C1P98194 919 aaPredicted RBP12.69□□□□□ -0.38
SPEN-205ENST00000487496 CUL4AQ13619 759 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 EIF2AQ9BY44 585 aaKnown RBP12.69□□□□□ -0.38
SPEN-205ENST00000487496 CSRNP2Q9H175 543 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 TLE6Q9H808 572 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 RSAD1Q9HA92 442 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
SPEN-205ENST00000487496 IPPQ9Y573 584 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
SPEN-205ENST00000487496 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 PER2O15055 1255 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPEN-205ENST00000487496 GALTP07902 379 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 ITGA4P13612 1032 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 RNASELQ05823 741 aaKnown RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 FAM178BQ8IXR5 827 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 URGCPQ8TCY9 931 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 BSNDQ8WZ55 320 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 FZD8Q9H461 694 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
SPEN-205ENST00000487496 UBN1Q9NPG3 1134 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 ENTPD7Q9NQZ7 604 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 HES2Q9Y543 173 aa12.68□□□□□ -0.38
SPEN-205ENST00000487496 E9PMD0 336 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 B4GALT3O60512 393 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 DDHD2O94830 711 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 EYA4O95677 639 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 GLP2RO95838 553 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 POMCP01189 267 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 NAMPTP43490 491 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 NDUFV1P49821 464 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 CLUL1Q15846 466 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 DUSP6Q16828 381 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 PLPP4Q5VZY2 271 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 CDR2LQ86X02 465 aaPredicted RBP12.67□□□□□ -0.38
SPEN-205ENST00000487496 ZBTB8OSQ8IWT0 167 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 TMEM169Q96HH4 297 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 MSLNLQ96KJ4 702 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 CDCA3Q99618 268 aaPredicted RBP12.67□□□□□ -0.38
SPEN-205ENST00000487496 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 CD320Q9NPF0 282 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 PRMT7Q9NVM4 692 aaPredicted RBP12.67□□□□□ -0.38
SPEN-205ENST00000487496 CLEC1BQ9P126 229 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 DNM3Q9UQ16 869 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
SPEN-205ENST00000487496 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 VWA3AA6NCI4 1184 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 INPPL1O15357 1258 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 SLC11A1P49279 550 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms