RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 HIPK4Q8NE63 616 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 DACT3Q96B18 629 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 TSC22D3Q99576 134 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 CHP1Q99653 195 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 NVLO15381 856 aaKnown RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 MARK3P27448 753 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 STXBP2Q15833 593 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 GIMAP8Q8ND71 665 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 KLHL8Q9P2G9 620 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 PPP1R37O75864 691 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 KRT14P02533 472 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 SLC4A1P02730 911 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 PAMP19021 973 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 INPP1P49441 399 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 Q3C1V9 767 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 TRIM15Q9C019 465 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-206ENST00000487222 ETNK1Q9HBU6 452 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 DONSONQ9NYP3 566 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 AMACRQ9UHK6 382 aa15.66■□□□□ 0.1
EPHB4-206ENST00000487222 F5H6K3 240 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 ARFIP2P53365 341 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 KLRC3Q07444 240 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 DPYDQ12882 1025 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 NR1I3Q14994 352 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 RYBPQ8N488 228 aaPredicted RBP15.65■□□□□ 0.1
EPHB4-206ENST00000487222 ATP11CQ8NB49 1132 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 FBXO40Q9UH90 709 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 HEY1Q9Y5J3 304 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 GOLGA8MH3BSY2 632 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 GPS1Q13098 491 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 SLC18A3Q16572 532 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 NSUN6Q8TEA1 469 aaKnown RBP15.65■□□□□ 0.1
EPHB4-206ENST00000487222 ZNF609O15014 1411 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 GNA15P30679 374 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 STAT3P40763 770 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 CATSPER4Q7RTX7 472 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 PPM1NQ8N819 430 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 PPP1R16BQ96T49 567 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 PIM2Q9P1W9 311 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
EPHB4-206ENST00000487222 SDC4P31431 198 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 ACAD11Q709F0 780 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
EPHB4-206ENST00000487222 DDX56Q9NY93 547 aaKnown RBP15.65■□□□□ 0.1
EPHB4-206ENST00000487222 PAPOLAP51003 745 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 PDIA2Q13087 525 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 BYSLQ13895 437 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 DSTYKQ6XUX3 929 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 EIF2AK1Q9BQI3 630 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 LXNQ9BS40 222 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 KRT82Q9NSB4 513 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 SUN2Q9UH99 717 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 AFF2P51816 1311 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 RHOBTB3O94955 611 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 EYA4O95677 639 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 PSMC5P62195 406 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 CDR2Q01850 454 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 C1orf146Q5VVC0 180 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ZC3H15Q8WU90 426 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 SCG3Q8WXD2 468 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ANLNQ9NQW6 1124 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 TOPORSQ9NS56 1045 aaPredicted RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 DCTN4Q9UJW0 460 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 EMSYQ7Z589 1322 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ECE2O60344 883 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 C12orf60Q5U649 245 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 IZUMO3Q5VZ72 239 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 LMTK2Q8IWU2 1503 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 FOXP2O15409 715 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 PYGBP11216 843 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 COPS2P61201 443 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ZBTB17Q13105 803 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ZNF568Q3ZCX4 644 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 PARP9Q8IXQ6 854 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 ZBED8Q8IZ13 594 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 AGPAT1Q99943 283 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 VPS11Q9H270 941 aa15.64■□□□□ 0.09
EPHB4-206ENST00000487222 FNDC3AQ9Y2H6 1198 aaKnown RBP15.64■□□□□ 0.09
EPHB4-206ENST00000487222 EPHB1P54762 984 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 GUCY1A3Q02108 690 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 PSPC1Q8WXF1 523 aaKnown RBP15.63■□□□□ 0.09
EPHB4-206ENST00000487222 ANKRD7Q92527 254 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 C7orf25Q9BPX7 421 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 UBN1Q9NPG3 1134 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 WDR70Q9NW82 654 aa15.63■□□□□ 0.09
EPHB4-206ENST00000487222 SENP1Q9P0U3 644 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms