RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PRAMEF22A3QJZ6 481 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 C2orf78A6NCI8 922 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 KRTAP29-1A8MX34 341 aaPredicted RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 GRXCR1A8MXD5 290 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 H7C1D1 291 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 CLASP2O75122 1294 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 ZBTB48P10074 688 aaPredicted RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 ID4P47928 161 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 GUCY2FP51841 1108 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 KPNA1P52294 538 aaPredicted RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 TMPRSS15P98073 1019 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 IRF9Q00978 393 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 EXOSC10Q01780 885 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 FAM50AQ14320 339 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 BRDTQ58F21 947 aaPredicted RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 RABL3Q5HYI8 236 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 NOSTRINQ8IVI9 506 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 GSPT2Q8IYD1 628 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 ZNF276Q8N554 614 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 EFHBQ8N7U6 833 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 WDR48Q8TAF3 677 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 PGBD4Q96DM1 585 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 METTL14Q9HCE5 456 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 ADARB2Q9NS39 739 aaKnown RBP4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 OXSMQ9NWU1 459 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 SLC5A4Q9NY91 659 aa4.84□□□□□ -1.63
SNRNP27-204ENST00000487029 WASHC2CQ9Y4E1 1318 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 HIP1RO75146 1068 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 KRT37O76014 449 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 RHOBTB3O94955 611 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 ZNF174Q15697 407 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 FAM111BQ6SJ93 734 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 ADGRG3Q86Y34 549 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 ELOA2Q8IYF1 753 aaPredicted RBP4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 PUS7LQ9H0K6 701 aaKnown RBP4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 EMC7Q9NPA0 242 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
SNRNP27-204ENST00000487029 UBE2QL1A1L167 161 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 ZAR1LA6NP61 321 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 SCDO00767 359 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 ULK1O75385 1050 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 S100BP04271 92 aaPredicted RBP4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 ZFP36P26651 326 aaKnown RBP4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 CLK3P49761 638 aaKnown RBP4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 PTTG1IPP53801 180 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 OLFML1Q6UWY5 402 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 HTR3DQ70Z44 454 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 PASD1Q8IV76 773 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 KIAA1958Q8N8K9 716 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 ANKRD53Q8N9V6 530 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 PROKR1Q8TCW9 393 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 DLG3Q92796 817 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 MNTQ99583 582 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 PRDM13Q9H4Q3 707 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 PCIF1Q9H4Z3 704 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 SPO11Q9Y5K1 396 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 RBM8AQ9Y5S9 174 aaKnown RBP4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 B3GALT1Q9Y5Z6 326 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 HS3ST4Q9Y661 456 aa4.82□□□□□ -1.64
SNRNP27-204ENST00000487029 DVL2O14641 736 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 KATNA1O75449 491 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 KIF11P52732 1056 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 FAPQ12884 760 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 IQSEC1Q6DN90 963 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 CC2D1AQ6P1N0 951 aaPredicted RBP4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 COG1Q8WTW3 980 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 SLC5A5Q92911 643 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 GBP4Q96PP9 640 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 ELF4Q99607 663 aaPredicted RBP4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 ACSS2Q9NR19 701 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 KCNH7Q9NS40 1196 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 FZD1Q9UP38 647 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 VWA7Q9Y334 891 aa4.81□□□□□ -1.64
SNRNP27-204ENST00000487029 COL11A2P13942 1736 aaPredicted RBP4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 KIAA0355O15063 1070 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 TGM5O43548 720 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 SLC9A1P19634 815 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 SESN3P58005 492 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ANTXR2P58335 489 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 BPIFB4P59827 614 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ITKQ08881 620 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 MTMR1Q13613 665 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 DDB1Q16531 1140 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ODR4Q5SWX8 454 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 KLHDC10Q6PID8 442 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 SYCE2Q6PIF2 218 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 HDGFL2Q7Z4V5 671 aaPredicted RBP4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 CNTD1Q8N815 330 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 BEND2Q8NDZ0 799 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ATXN2LQ8WWM7 1075 aaKnown RBP4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 SLC7A6OSQ96CW6 309 aaPredicted RBP4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
SNRNP27-204ENST00000487029 TOMM22Q9NS69 142 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms