RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NELFCDQ8IXH7 590 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 TMEM174Q8WUU8 243 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 SCLT1Q96NL6 688 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 ACCSQ96QU6 501 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 BPIFA3Q9BQP9 254 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 IKZF4Q9H2S9 585 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 HIPK3Q9H422 1215 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 TMEM206Q9H813 350 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 PRMT7Q9NVM4 692 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 CTNND2Q9UQB3 1225 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 GINS2Q9Y248 185 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 SQORQ9Y6N5 450 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.73
MCF2L-227ENST00000486806 KIAA0100Q14667 2235 aaKnown RBP10.52□□□□□ -0.73
MCF2L-227ENST00000486806 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 INO80B-WBP1J3KQ70 363 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 K7ERI5 159 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 ABLIM1O14639 778 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 B4GALT5O43286 388 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 PROZP22891 400 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 SFPQP23246 707 aaKnown RBP eCLIP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 CCNE1P24864 410 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 ERCC5P28715 1186 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 STRN3Q13033 797 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 LPIN1Q14693 890 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 GPNMBQ14956 572 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 NFIL3Q16649 462 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 ZPBP2Q6X784 338 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 ZC3H3Q8IXZ2 948 aaKnown RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 NELFBQ8WX92 580 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 P2RX5Q93086 422 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 ANP32EQ9BTT0 268 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 MRPL4Q9BYD3 311 aaKnown RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 OSBPL7Q9BZF2 842 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 INO80BQ9C086 356 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 GBP3Q9H0R5 595 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 WNT8AQ9H1J5 351 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 AGPAT3Q9NRZ7 376 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 AGPAT5Q9NUQ2 364 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TYW1Q9NV66 732 aaKnown RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 EXOC7Q9UPT5 735 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 NOC2LQ9Y3T9 749 aaKnown RBP10.51□□□□□ -0.73
MCF2L-227ENST00000486806 STYXL1Q9Y6J8 313 aa10.51□□□□□ -0.73
MCF2L-227ENST00000486806 TRIM43BA6NCK2 446 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TRIM49BA6NDI0 452 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TISP43B9A030 160 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 RBAK-RBAKDNI3L0D1 243 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 PDXKO00764 312 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 HNRNPDLO14979 420 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 KIAA0355O15063 1070 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 CAVIN2O95810 425 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 GHRP10912 638 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 FGFR4P22455 802 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 ADSSP30520 456 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 HOXA11P31270 313 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 LRRC63Q05C16 580 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 PRPF4BQ13523 1007 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 KLHL10Q6JEL2 608 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TSHZ1Q6ZSZ6 1077 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 C12orf56Q8IXR9 622 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TRIM43Q96BQ3 446 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 ACO2Q99798 780 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 AGO3Q9H9G7 860 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 PTPRHQ9HD43 1115 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 ERVK-5Q9HDB9 667 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TMEM39AQ9NV64 488 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
MCF2L-227ENST00000486806 USP20Q9Y2K6 914 aa10.5□□□□□ -0.73
MCF2L-227ENST00000486806 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 A0A1B0GUA9 196 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 BICDL2A1A5D9 508 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 CCDC85CA6NKD9 419 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ANKRD63C9JTQ0 380 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 FAM189A1O60320 539 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 NBNO60934 754 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 RPS6KA5O75582 802 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 TOM1L1O75674 476 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ERLIN2O94905 339 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 PARNO95453 639 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 CXCL10P02778 98 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ARF4P18085 180 aaPredicted RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ITGB8P26012 769 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 AXLP30530 894 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ZNF165P49910 485 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 LIG4P49917 911 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 NCAPHQ15003 741 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 IQCB1Q15051 598 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms