RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 VAT1LQ9HCJ6 419 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 BMP2KQ9NSY1 1161 aaPredicted RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SLIT2O94813 1529 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ADAMTS2O95450 1211 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ATP5DP30049 168 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 KCNJ1P48048 391 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 MECOMQ03112 1051 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CCDC65Q8IXS2 484 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 REXO1Q8N1G1 1221 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 FAM81AQ8TBF8 368 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CTNNBL1Q8WYA6 563 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 KRT35Q92764 455 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 LRRC37BQ96QE4 947 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 POP1Q99575 1024 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 THAP2Q9H0W7 228 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 SCOCQ9UIL1 159 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 USP20Q9Y2K6 914 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ALG6Q9Y672 507 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 LAMB1P07942 1786 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TCRBV7S2A1N4TA0A589 114 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 XRCC5P13010 732 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 MARCKSL1P49006 195 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CASP5P51878 434 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 SESN3P58005 492 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CLUL1Q15846 466 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 KHDC1Q4VXA5 237 aaKnown RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TCERG1LQ5VWI1 586 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ARHGEF18Q6ZSZ5 1173 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CCDC105Q8IYK2 499 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 DCLRE1BQ9H816 532 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TAS2R14Q9NYV8 317 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 TBK1Q9UHD2 729 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
CCDC171-208ENST00000486641 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-208ENST00000486641 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 CBX6O95503 412 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 TTLL1O95922 423 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 STAT1P42224 750 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 USP4Q13107 963 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 RCN2Q14257 317 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 SH3TC2Q8TF17 1288 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 UBE2OQ9C0C9 1292 aaKnown RBP11.42□□□□□ -0.58
CCDC171-208ENST00000486641 NT5C3AQ9H0P0 336 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 ZHX3Q9H4I2 956 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 GCNT4Q9P109 453 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 ZBTB1Q9Y2K1 713 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 KIAA1551Q9HCM1 1747 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 MAPK13O15264 365 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 TP73O15350 636 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 ATP9AO75110 1047 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LGR5O75473 907 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 AKAP3O75969 853 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 CETPP11597 493 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LMNB1P20700 586 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 CHKAP35790 457 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 COILP38432 576 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-208ENST00000486641 VHLP40337 213 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-208ENST00000486641 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 CYFIP1Q7L576 1253 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LRRC8CQ8TDW0 803 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 NRG4Q8WWG1 115 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 PIGBQ92521 554 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 PIGSQ96S52 555 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LZTS2Q9BRK4 669 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 SPZ1Q9BXG8 430 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 NKIRAS1Q9NYS0 192 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 G3BP2Q9UN86 482 aaKnown RBP11.42□□□□□ -0.58
CCDC171-208ENST00000486641 LRCH1Q9Y2L9 728 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
CCDC171-208ENST00000486641 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 PYGBP11216 843 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 HSPA6P17066 643 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 RXRBP28702 533 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 CACNA2D1P54289 1103 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 WDR4P57081 412 aaKnown RBP11.41□□□□□ -0.58
CCDC171-208ENST00000486641 STRN3Q13033 797 aa11.41□□□□□ -0.58
CCDC171-208ENST00000486641 KYNUQ16719 465 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms