RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 GPNMBQ14956 572 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 E2F4Q16254 413 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TRIM71Q2Q1W2 868 aaKnown RBP9.91□□□□□ -0.82
COL12A1-208ENST00000486533 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 CNKSR3Q6P9H4 555 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF662Q6ZS27 426 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 KRT25Q7Z3Z0 450 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 GRAMD1CQ8IYS0 662 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 DHTKD1Q96HY7 919 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-208ENST00000486533 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TSGA10Q9BZW7 698 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 RNPEPQ9H4A4 650 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 ABHD10Q9NUJ1 306 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 SETD4Q9NVD3 440 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
COL12A1-208ENST00000486533 TTC28Q96AY4 2481 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 PTPRSQ13332 1948 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 EMSYQ7Z589 1322 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 RSPH10B2B2RC85 870 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 RBAK-RBAKDNI3L0D1 243 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CXCL10P02778 98 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CTSHP09668 335 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 RSPH10BP0C881 870 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 KCNA2P16389 499 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CASP14P31944 242 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 UBA7P41226 1012 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 DNM2P50570 870 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 ADCY7P51828 1080 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 ARHGAP4P98171 946 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 IKBKEQ14164 716 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 KARSQ15046 597 aaKnown RBP9.9□□□□□ -0.82
COL12A1-208ENST00000486533 KRT31Q15323 416 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CCDC85BQ15834 202 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-208ENST00000486533 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 TCP11X2Q5H9J9 407 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 TMCO2Q7Z6W1 182 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-208ENST00000486533 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 MSANTD4Q8NCY6 345 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 RUBCNQ92622 972 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 WDR24Q96S15 920 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CCSER1Q9C0I3 900 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 CERS4Q9HA82 394 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 DISC1Q9NRI5 854 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 PSD3Q9NYI0 1048 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 UBIAD1Q9Y5Z9 338 aa9.9□□□□□ -0.82
COL12A1-208ENST00000486533 ABHD14A-ACY1A0A1B0GW23 586 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 STXBP3O00186 592 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 KRT86O43790 486 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 EFCAB14O75071 495 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 LGR5O75473 907 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 MARK3P27448 753 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 GNA11P29992 359 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 HOXC8P31273 242 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 MCM7P33993 719 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 STX17P56962 302 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 DEFB103AP81534 67 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 MBTPS1Q14703 1052 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 FKBP15Q5T1M5 1219 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 APTXQ7Z2E3 356 aaKnown RBP9.89□□□□□ -0.83
COL12A1-208ENST00000486533 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 OR8K1Q8NGG5 319 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 ARNTL2Q8WYA1 636 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 SEPT1Q8WYJ6 367 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 GLG1Q92896 1179 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 KCTD12Q96CX2 325 aaKnown RBP9.89□□□□□ -0.83
COL12A1-208ENST00000486533 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 LUC7L2Q9Y383 392 aaKnown RBP9.89□□□□□ -0.83
COL12A1-208ENST00000486533 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
COL12A1-208ENST00000486533 LGALS16A8MUM7 142 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 RFXAPO00287 272 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MAFGO15525 162 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 FOSP01100 380 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 GYPCP04921 128 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 TAP1Q03518 808 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 UBXN1Q04323 297 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 SMC1AQ14683 1233 aaKnown RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 TCTN1Q2MV58 587 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 HSP90AA4PQ58FG1 418 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 USP49Q70CQ1 688 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CCDC170Q8IYT3 715 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms