RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 FIBCD1Q8N539 461 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 CNNM3Q8NE01 707 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-208ENST00000484246 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-208ENST00000484246 REEP2Q9BRK0 252 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 TMEM117Q9H0C3 514 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 CUEDC2Q9H467 287 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 TMEM134Q9H6X4 195 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 PCDHA7Q9UN72 937 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 RWDD3Q9Y3V2 267 aa17.54■□□□□ 0.4
UPF3A-208ENST00000484246 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 C5orf67F2Z3F1 127 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 ACKR2O00590 384 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 POU3F3P20264 500 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-208ENST00000484246 ME1P48163 572 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 PEX3P56589 373 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-208ENST00000484246 E2F4Q16254 413 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 RESP18Q5W5W9 173 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 KIFC3Q9BVG8 833 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-208ENST00000484246 LARSQ9P2J5 1176 aaKnown RBP17.53■□□□□ 0.4
UPF3A-208ENST00000484246 STXBP5LQ9Y2K9 1186 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 PCDHB2Q9Y5E7 798 aa17.53■□□□□ 0.4
UPF3A-208ENST00000484246 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 H0YCG3 227 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 INPPL1O15357 1258 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 B4GALT5O43286 388 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 PRKCBP05771 671 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
UPF3A-208ENST00000484246 STAT6P42226 847 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 GIT2Q14161 759 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 PGBD4Q96DM1 585 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 FAM161BQ96MY7 647 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
UPF3A-208ENST00000484246 TNMDQ9H2S6 317 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 MAGEF1Q9HAY2 307 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 PARVGQ9HBI0 331 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 KMT5AQ9NQR1 393 aa17.52■□□□□ 0.4
UPF3A-208ENST00000484246 A0A0C4DFX4 3053 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 N4BP3O15049 544 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 RB1P06400 928 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 FGFR1P11362 822 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 ANP32AP39687 249 aaKnown RBP17.51■□□□□ 0.39
UPF3A-208ENST00000484246 GATMP50440 423 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 NCKAP1LP55160 1127 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 PRPF4BQ13523 1007 aaKnown RBP17.51■□□□□ 0.39
UPF3A-208ENST00000484246 SLC27A1Q6PCB7 646 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 SV2BQ7L1I2 683 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 TAS1R3Q7RTX0 852 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 SPRED2Q7Z698 418 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 LRRC43Q8N309 656 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 GBF1Q92538 1859 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 CASD1Q96PB1 797 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 PLVAPQ9BX97 442 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 MRPL9Q9BYD2 267 aaKnown RBP17.51■□□□□ 0.39
UPF3A-208ENST00000484246 PRDM12Q9H4Q4 367 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 POLD4Q9HCU8 107 aa17.51■□□□□ 0.39
UPF3A-208ENST00000484246 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
UPF3A-208ENST00000484246 NPHP3-ACAD11A0A0J9YXS1 232 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 FAM237AA0A1B0GTK4 181 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 CCDC169A6NNP5 214 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 TBCAO75347 108 aaKnown RBP17.5■□□□□ 0.39
UPF3A-208ENST00000484246 EDN1P05305 212 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 ABCD1P33897 745 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 SMTNP53814 917 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 RAD51AP2Q09MP3 1159 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 EPC2Q52LR7 807 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 ADALQ6DHV7 355 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 TMEM192Q8IY95 271 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 IQUBQ8NA54 791 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 SMG8Q8ND04 991 aaKnown RBP17.5■□□□□ 0.39
UPF3A-208ENST00000484246 ARNTL2Q8WYA1 636 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 FIZ1Q96SL8 496 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 C17orf80Q9BSJ5 609 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 ST6GALNAC4Q9H4F1 302 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 PDZD7Q9H5P4 517 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 KBTBD4Q9NVX7 518 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
UPF3A-208ENST00000484246 COL6A3P12111 3177 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 MYMKA6NI61 221 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 TBKBP1A7MCY6 615 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 K7ERI5 159 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 LPXNO60711 386 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 FAM13AO94988 1023 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 MAPTP10636 758 aaKnown RBP17.49■□□□□ 0.39
UPF3A-208ENST00000484246 CMA1P23946 247 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 BMPR1AP36894 532 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 ADGRE1Q14246 886 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 DHX8Q14562 1220 aaKnown RBP17.49■□□□□ 0.39
UPF3A-208ENST00000484246 NT5DC1Q5TFE4 455 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms