RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 C22orf31O95567 290 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CXCL10P02778 98 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 VTNP04004 478 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 BMP6P22004 513 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 KLRC1P26715 233 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CD52P31358 61 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ASIC1P78348 528 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 KRT76Q01546 638 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CYP4A11Q02928 519 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 SPAG1Q07617 926 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 LPIN1Q14693 890 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 MTERF2Q49AM1 385 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 NCAPH2Q6IBW4 605 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF746Q6NUN9 644 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CNNM4Q6P4Q7 775 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CNKSR3Q6P9H4 555 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 PLPPR4Q7Z2D5 763 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 MIER3Q7Z3K6 550 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 RPUSD2Q8IZ73 545 aaKnown RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 MYOCDQ8IZQ8 938 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ATP8B4Q8TF62 1192 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 LINC01599Q8WXQ3 324 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 LARP4BQ92615 738 aaKnown RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 C7orf25Q9BPX7 421 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 XPO4Q9C0E2 1151 aaKnown RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF576Q9H609 170 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 KCNMB3Q9NPA1 279 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 RRAGDQ9NQL2 400 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 TBC1D22BQ9NU19 505 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 EXOC1Q9NV70 894 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 FANCLQ9NW38 375 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 RGL1Q9NZL6 768 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 SEPT9Q9UHD8 586 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 PCDHA10Q9Y5I2 948 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 PSMA7O14818 248 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CSDE1O75534 798 aaKnown RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 RHOBTB3O94955 611 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 OATP04181 439 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PSAPP07602 524 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 ACTN1P12814 892 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 FGFR4P22455 802 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CASP1P29466 404 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 RFC2P35250 354 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CCT6AP40227 531 aaKnown RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 KCNJ6P48051 423 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 MRPS6P82932 125 aaKnown RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PAK1Q13153 545 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 ADGRE1Q14246 886 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CTTNQ14247 550 aaKnown RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 KIZQ2M2Z5 673 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 NAALADL2Q58DX5 795 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PLEKHG4Q58EX7 1191 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 FAM160B1Q5W0V3 765 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PPP2R2DQ66LE6 453 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 B3GNT9Q6UX72 402 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 FILIP1Q7Z7B0 1213 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 HERC6Q8IVU3 1022 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 METTL13Q8N6R0 699 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 USP38Q8NB14 1042 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CCDC150Q8NCX0 1101 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PPM1EQ8WY54 764 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 OSMRQ99650 979 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 IFIH1Q9BYX4 1025 aaKnown RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 TRIM9Q9C026 710 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 RWDD2AQ9UIY3 292 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 CTNND2Q9UQB3 1225 aa7.65□□□□□ -1.18
BRCA1-216ENST00000484087 MAFBQ9Y5Q3 323 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-216ENST00000484087 MUC3AQ02505 3323 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 PVALEFA0A1B0GWK0 134 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 BICDL2A1A5D9 508 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 PPP1R3GB7ZBB8 358 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 STBD1O95210 358 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 TPM2P07951 284 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 PFKMP08237 780 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 GNAT1P11488 350 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 FOSL2P15408 326 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 GATMP50440 423 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 NPEPPSP55786 919 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 GRB10Q13322 594 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 AMHR2Q16671 573 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 FBXO47Q5MNV8 452 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 TMC6Q7Z403 805 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 SMAP1Q8IYB5 467 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 MICALL1Q8N3F8 863 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 NOC3LQ8WTT2 800 aaKnown RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 NELFBQ8WX92 580 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 RAD54LQ92698 747 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 DHTKD1Q96HY7 919 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 DYDC2Q96IM9 177 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 ZNF830Q96NB3 372 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 RIT2Q99578 217 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 MTRQ99707 1265 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 MMTAG2Q9BU76 263 aaKnown RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 MTIF3Q9H2K0 278 aaKnown RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 SUGCTQ9HAC7 445 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms