RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 FAM13CQ8NE31 585 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 DPH5Q9H2P9 285 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ATP9AO75110 1047 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CYP1A1P04798 512 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CEP128Q6ZU80 1094 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 TRIM7Q9C029 511 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 NT5C3AQ9H0P0 336 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 LRCH1Q9Y2L9 728 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.426e-7■□□□□ 10.6
SEC61A1-205ENST00000483956 DPY19L2P1Q6NXN4 242 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 IRF2BP2Q7Z5L9 587 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CCDC65Q8IXS2 484 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 MGARPQ8TDB4 240 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 SEC14L1Q92503 715 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 TMEM237Q96Q45 408 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-9■□□□□ 9
SEC61A1-205ENST00000483956 NENFQ9UMX5 172 aa12.43□□□□□ -0.42
SEC61A1-205ENST00000483956 ENTPD5O75356 428 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 UNC5CO95185 931 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 PTK2Q05397 1052 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 DDB1Q16531 1140 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 PTPROQ16827 1216 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 ASPRV1Q53RT3 343 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 ENDOVQ8N8Q3 282 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 HAS1Q92839 578 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 CTTNBP2NLQ9P2B4 639 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 AMACRQ9UHK6 382 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 SIGLEC16A6NMB1 481 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 USP17L5A8MUK1 530 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 TJP3O95049 919 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 GJB6O95452 261 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 PRKCIP41743 596 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 EIF3BP55884 814 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 SLFN11Q7Z7L1 901 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 TRIM31Q9BZY9 425 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 FAM192AQ9GZU8 254 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 ETNK2Q9NVF9 386 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 CTNNAL1Q9UBT7 734 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 ARL2BPQ9Y2Y0 163 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 USH1CQ9Y6N9 552 aa12.42□□□□□ -0.42
SEC61A1-205ENST00000483956 A0A0A6YYK5 440 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 RGS16O15492 202 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 TMCC1O94876 653 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 EPS15P42566 896 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 ARID5AQ03989 594 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 MGAT5Q09328 741 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 CNGA2Q16280 664 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 P3H1Q32P28 736 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 ZNF365Q70YC5 407 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 ZNF571Q7Z3V5 609 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 EXOC3L1Q86VI1 746 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 CELF4Q9BZC1 486 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 DDX25Q9UHL0 483 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 INTUQ9ULD6 942 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 NOC2LQ9Y3T9 749 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 TMEM221A6NGB7 291 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 GFPT2O94808 682 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 SNHG28P0DPA3 235 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 PAX3P23760 479 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 CBX3Q13185 183 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 SPDYCQ5MJ68 293 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 NCSTNQ92542 709 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 MKL1Q969V6 931 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 SPATA16Q9BXB7 569 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 UBA5Q9GZZ9 404 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 NAGPAQ9UK23 515 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 CHMP2BQ9UQN3 213 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms