RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 KRT77Q7Z794 578 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 KIAA0319LQ8IZA0 1049 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 NPLOC4Q8TAT6 608 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 ALG3Q92685 438 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 MVB12AQ96EY5 273 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 ORAI2Q96SN7 254 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 VPS11Q9H270 941 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 TMPRSS5Q9H3S3 457 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 UNC45AQ9H3U1 944 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 KIAA1586Q9HCI6 787 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 DNAJC28Q9NX36 388 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 KCNG1Q9UIX4 513 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 PALD1Q9ULE6 856 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 L1RE1Q9UN81 338 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 POLHQ9Y253 713 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 GLI4P10075 376 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 IFNGR1P15260 489 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 AGXTP21549 392 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 PEX2P28328 305 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 POLD1P28340 1107 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 PPM1AP35813 382 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 GPSM2P81274 684 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 LACTBP83111 547 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 SMAD3P84022 425 aaKnown RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 NUCB1Q02818 461 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 ICA1Q05084 483 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 TOMM20Q15388 145 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 SMAD2Q15796 467 aaKnown RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 FAM133BQ5BKY9 247 aaKnown RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 CC2D1AQ6P1N0 951 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 USP45Q70EL2 814 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 B3GNT8Q7Z7M8 397 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 CABP7Q86V35 215 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 CMIPQ8IY22 773 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 ZZZ3Q8IYH5 903 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 MYCT1Q8N699 235 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 FRS2Q8WU20 508 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 NAP1L5Q96NT1 182 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 GPR20Q99678 358 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 EIF2AK1Q9BQI3 630 aaKnown RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.29□□□□□ -1.566e-9■■■■□ 23.3
PTCD3-214ENST00000483925 SMOC1Q9H4F8 434 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 ZNF277Q9NRM2 450 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-214ENST00000483925 CATSPERZQ9NTU4 200 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 PDP2Q9P2J9 529 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 GPR52Q9Y2T5 361 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 GPR45Q9Y5Y3 372 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 BACE2Q9Y5Z0 518 aa5.29□□□□□ -1.56
PTCD3-214ENST00000483925 SLC12A8A0AV02 714 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 C2orf71A6NGG8 1288 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 CAPN8A6NHC0 703 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 hCG_1984214I3L0E3 225 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 B3GALT2O43825 422 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 ORC4O43929 436 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 UBXN7O94888 489 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
PTCD3-214ENST00000483925 PDCP20941 246 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 MC3RP41968 323 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 RXRGP48443 463 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-214ENST00000483925 BLMHQ13867 455 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 ZNF827Q17R98 1081 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 ANO6Q4KMQ2 910 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 CCDC38Q502W7 563 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 FAAH2Q6GMR7 532 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 RCSD1Q6JBY9 416 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 GPR155Q7Z3F1 870 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 CARFQ8N187 725 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 CISD2Q8N5K1 135 aaKnown RBP5.28□□□□□ -1.56
PTCD3-214ENST00000483925 PPP1R35Q8TAP8 253 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 ARL8AQ96BM9 186 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 TSPAN17Q96FV3 270 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 LTV1Q96GA3 475 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-214ENST00000483925 APOL5Q9BWW9 433 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 BHMT2Q9H2M3 363 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 PCIF1Q9H4Z3 704 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 IFT122Q9HBG6 1241 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 GJD2Q9UKL4 321 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 PADI4Q9UM07 663 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 SLC45A1Q9Y2W3 748 aa5.28□□□□□ -1.56
PTCD3-214ENST00000483925 RHPN2P1A8MT19 583 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 K7ENM7 598 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 M0R3H8 397 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 FOXN3O00409 490 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-214ENST00000483925 AURKAO14965 403 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 KDM1AO60341 852 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 NOBOXO60393 691 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 MAFKO60675 156 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 MSCO60682 206 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 HIP1RO75146 1068 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 KRT37O76014 449 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 MBD4O95243 580 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 MTHFD2P13995 350 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
PTCD3-214ENST00000483925 C5AR1P21730 350 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 CD40P25942 277 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 CALRP27797 417 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms