RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 B4GALT5O43286 388 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 MAPTP10636 758 aaKnown RBP21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 STRN3Q13033 797 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 CNKSR3Q6P9H4 555 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 ZNF365Q70YC5 407 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 C16orf59Q7L2K0 433 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 CPB2Q96IY4 423 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 CCDC113Q9H0I3 377 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 SLC39A2Q9NP94 309 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 OLFML3Q9NRN5 406 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 TSPAN1O60635 241 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 MYBP10242 640 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 CASP5P51878 434 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 NCBP1Q09161 790 aaKnown RBP21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 PRPF4BQ13523 1007 aaKnown RBP21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 NT5DC1Q5TFE4 455 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 PSRC1Q6PGN9 363 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 TAS1R3Q7RTX0 852 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 ZNF720Q7Z2F6 126 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 GLIS3Q8NEA6 775 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 SPATA20Q8TB22 786 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 APBB2Q92870 758 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 GSDMAQ96QA5 445 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.9■■□□□ 1.16e-7■■□□□ 12.1
TRAPPC12-220ENST00000482645 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 TMX1Q9H3N1 280 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 RMND1Q9NWS8 449 aa21.9■■□□□ 1.1
TRAPPC12-220ENST00000482645 ZBBXA8MT70 800 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 FGBP02675 491 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 EDN1P05305 212 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 ACTN1P12814 892 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 TYRO3Q06418 890 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 IKBKEQ14164 716 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 AMHR2Q16671 573 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 SLC17A8Q8NDX2 589 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 BICD1Q96G01 975 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 UBE2OQ9C0C9 1292 aaKnown RBP21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 FZD8Q9H461 694 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 TMEM134Q9H6X4 195 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 AGPAT5Q9NUQ2 364 aa21.89■■□□□ 1.09
TRAPPC12-220ENST00000482645 TTLL13PA6NNM8 815 aa21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 ACKR2O00590 384 aa21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 MGEA5O60502 916 aa21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 ZSCAN20P17040 1043 aaPredicted RBP21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 SARSP49591 514 aaKnown RBP21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 TMEM240Q5SV17 173 aa21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 CDR2LQ86X02 465 aaPredicted RBP21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 TBX20Q9UMR3 447 aa21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 RANBP2P49792 3224 aaKnown RBP21.88■■□□□ 1.09
TRAPPC12-220ENST00000482645 CCDC192P0DO97 292 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 ARF4P18085 180 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 ZNF445P59923 1031 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 EHHADHQ08426 723 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 PCBP1Q15365 356 aaKnown RBP eCLIP21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 STX1AQ16623 288 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 TWF2Q6IBS0 349 aaKnown RBP21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 PPP4R3CPQ6ZMV5 832 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 PRIMPOLQ96LW4 560 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 ADAM2Q99965 735 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 FTHL17Q9BXU8 183 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 PCDHB13Q9Y5F0 798 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 CNTNAP2Q9UHC6 1331 aa21.87■■□□□ 1.09
TRAPPC12-220ENST00000482645 PRPF6O94906 941 aaKnown RBP21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 GTF2BQ00403 316 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 KCNA1Q09470 495 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 STK4Q13043 487 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 MORC3Q14149 939 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 KCNB1Q14721 858 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 FAM187BQ17R55 369 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 NOTUMQ6P988 496 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 LRSAM1Q6UWE0 723 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 STXBP4Q6ZWJ1 553 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 TRIML1Q8N9V2 468 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 GDF15Q99988 308 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 FUCA2Q9BTY2 467 aa21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 TARS2Q9BW92 718 aaKnown RBP21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 MRPL4Q9BYD3 311 aaKnown RBP21.86■■□□□ 1.09
TRAPPC12-220ENST00000482645 RHOBTB3O94955 611 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 HOXA11P31270 313 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 NLRP12P59046 1061 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 PSMD2Q13200 908 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 DPCR1Q3MIW9 517 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 KIAA0895Q8NCT3 520 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 LINC01599Q8WXQ3 324 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 ST6GALNAC4Q9H4F1 302 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 GDAQ9Y2T3 454 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 MICAL3Q7RTP6 2002 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 HNRNPDLO14979 420 aaKnown RBP21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 PPP1R37O75864 691 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 ABCD1P33897 745 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 C9orf50Q5SZB4 431 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 L1TD1Q5T7N2 865 aaKnown RBP21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 ATF7IP2Q5U623 682 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 CHRDL2Q6WN34 429 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 NELFCDQ8IXH7 590 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 SMYD4Q8IYR2 804 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 SYCP3Q8IZU3 236 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 IKZF4Q9H2S9 585 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 CHST12Q9NRB3 414 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 ANKFY1Q9P2R3 1169 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms